Difference between revisions of "TSS:Hg 105414.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=17516 | |distance_to_tss=17516 | ||
|end=70833470 | |end=70833470 | ||
| Line 9: | Line 9: | ||
|entrez_id=8879 | |entrez_id=8879 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=S1PL | + | |gene_alias=NPHS14{{!}}S1PL{{!}}SPL |
|gene_description=sphingosine-1-phosphate lyase 1 | |gene_description=sphingosine-1-phosphate lyase 1 | ||
|gene_name=SGPL1 | |gene_name=SGPL1 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=70833464 | |start_of_center_position=70833464 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=83(GGCTATAAAGAC,-,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 18:13, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70833464 |
|---|---|
| End of the center position in the TSS region: | 70833465 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 17516 |
|---|---|
| Nearest PromoterID: | NM_003901 |
| Entrez ID: | 8879 |
| Nearest Unigene: | Hs.499984 |
| Nearest Refseq: | NM_003901 |
| Nearest Ensembl: | ENSG00000166224 |
| Gene Name: | SGPL1 |
| Gene Alias: | NPHS14|S1PL|SPL |
| Gene Description: | sphingosine-1-phosphate lyase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 83(GGCTATAAAGAC,-,0.00) |
