Difference between revisions of "TSS:Hg 105415.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000335350.10:0 NM_001244889:0 NM_170744 | + | |all_trans=ENST00000335350.10:0 NM_001244889:0 NM_170744:0 AK128132:0 AY358351:10 AB096256:13 ENST00000373192.4:348 AY126437:348 BC166694:406 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=71212579 | |end=71212579 | ||
|end_of_center_position=71212552 | |end_of_center_position=71212552 | ||
|entrez_id=219699 | |entrez_id=219699 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=UNC5H2 | + | |gene_alias=UNC5H2{{!}}p53RDL1 |
|gene_description=unc-5 netrin receptor B | |gene_description=unc-5 netrin receptor B | ||
|gene_id=219699 | |gene_id=219699 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:12568 | |hgnc_mgi_id=HGNC:12568 | ||
|nearest_ensembl=ENSG00000107731 | |nearest_ensembl=ENSG00000107731 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001244889 |
|nearest_refseq=NM_170744 | |nearest_refseq=NM_170744 | ||
|nearest_unigene=Hs.522997 | |nearest_unigene=Hs.522997 | ||
| − | |num_trans= | + | |num_trans=9 |
|p53RDL1= | |p53RDL1= | ||
|species=human | |species=human | ||
| Line 28: | Line 28: | ||
|start_of_center_position=71212551 | |start_of_center_position=71212551 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000335350.10 NM_001244889 NM_170744 | + | |transcript_name=ENST00000335350.10 NM_001244889 NM_170744 AK128132 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105415.1 | |tss_id=hg_105415.1 | ||
Revision as of 18:13, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71212551 |
|---|---|
| End of the center position in the TSS region: | 71212552 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000335350.10 NM_001244889 NM_170744 AK128132 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000335350.10:0 NM_001244889:0 NM_170744:0 AK128132:0 AY358351:10 AB096256:13 ENST00000373192.4:348 AY126437:348 BC166694:406 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001244889 |
| Entrez ID: | 219699 |
| Nearest Unigene: | Hs.522997 |
| Nearest Refseq: | NM_170744 |
| Nearest Ensembl: | ENSG00000107731 |
| Gene Name: | unc-5 netrin receptor B |
| Gene Alias: | UNC5H2|p53RDL1 |
| Gene Description: | unc-5 netrin receptor B |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
