Difference between revisions of "TSS:Hg 105416.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB096256:-86 AY358351:-89 ENST00000335350.10:-108 | + | |all_trans=AB096256:-86 AY358351:-89 ENST00000335350.10:-108 NM_001244889:-108 NM_170744:-108 AK128132:-143 ENST00000373192.4:243 AY126437:243 BC166694:301 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
|distance=-86 | |distance=-86 | ||
| − | |distance_to_tss= | + | |distance_to_tss=111 |
|end=71212684 | |end=71212684 | ||
|end_of_center_position=71212681 | |end_of_center_position=71212681 | ||
|entrez_id=219699 | |entrez_id=219699 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=UNC5H2 | + | |gene_alias=UNC5H2{{!}}p53RDL1 |
|gene_description=unc-5 netrin receptor B | |gene_description=unc-5 netrin receptor B | ||
|gene_id=219699 | |gene_id=219699 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_170744 | |nearest_refseq=NM_170744 | ||
|nearest_unigene=Hs.522997 | |nearest_unigene=Hs.522997 | ||
| − | |num_trans= | + | |num_trans=9 |
|p53RDL1= | |p53RDL1= | ||
|species=human | |species=human | ||
Revision as of 18:13, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71212680 |
|---|---|
| End of the center position in the TSS region: | 71212681 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB096256 |
|---|---|
| Distance: | -86 |
| Num_trans: | 9 |
| All_trans: | AB096256:-86 AY358351:-89 ENST00000335350.10:-108 NM_001244889:-108 NM_170744:-108 AK128132:-143 ENST00000373192.4:243 AY126437:243 BC166694:301 |
TATA-Box annotation
| Distance to TSS: | 111 |
|---|---|
| Nearest PromoterID: | NM_170744 |
| Entrez ID: | 219699 |
| Nearest Unigene: | Hs.522997 |
| Nearest Refseq: | NM_170744 |
| Nearest Ensembl: | ENSG00000107731 |
| Gene Name: | unc-5 netrin receptor B |
| Gene Alias: | UNC5H2|p53RDL1 |
| Gene Description: | unc-5 netrin receptor B |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
