Difference between revisions of "TSS:Hg 105570.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=LF333167:11 MA568744:11 LF333166:-88 MA568743:-88 LF333165:-439 MA568742:-439 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=11 |
|distance_to_tss=5375 | |distance_to_tss=5375 | ||
|end=73917411 | |end=73917411 | ||
| Line 8: | Line 9: | ||
|entrez_id=414236 | |entrez_id=414236 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
| − | |gene_alias= | + | |gene_alias=- |
|gene_description=chromosome 10 open reading frame 55 | |gene_description=chromosome 10 open reading frame 55 | ||
|gene_name=C10orf55 | |gene_name=C10orf55 | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|nearest_ensembl=ENSG00000222047 | |nearest_ensembl=ENSG00000222047 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_160937 |
|nearest_refseq=NM_001001791 | |nearest_refseq=NM_001001791 | ||
|nearest_unigene=Hs.585453 | |nearest_unigene=Hs.585453 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=73917392 | |start=73917392 | ||
|start_of_center_position=73917401 | |start_of_center_position=73917401 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF333167 MA568744 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105570.1 | |tss_id=hg_105570.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 18:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73917401 |
|---|---|
| End of the center position in the TSS region: | 73917402 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF333167 MA568744 |
|---|---|
| Distance: | 11 |
| Num_trans: | 6 |
| All_trans: | LF333167:11 MA568744:11 LF333166:-88 MA568743:-88 LF333165:-439 MA568742:-439 |
TATA-Box annotation
| Distance to TSS: | 5375 |
|---|---|
| Nearest PromoterID: | NR_160937 |
| Entrez ID: | 414236 |
| Nearest Unigene: | Hs.585453 |
| Nearest Refseq: | NM_001001791 |
| Nearest Ensembl: | ENSG00000222047 |
| Gene Name: | C10orf55 |
| Gene Alias: | - |
| Gene Description: | chromosome 10 open reading frame 55 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
