Difference between revisions of "TSS:Hg 105600.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MYST4= | |MYST4= | ||
|ZC2HC6B= | |ZC2HC6B= | ||
| − | |all_trans=ENST00000372725. | + | |all_trans=ENST00000649006.1:0 ENST00000649463.1:0 NM_001370133:0 NM_001370134:0 NM_001370143:0 NM_001370141:0 NM_001370140:0 NM_001370138:0 NM_001370136:0 ENST00000372725.6:6 ENST00000650232.1:34 ENST00000648370.1:42 ENST00000648899.1:65 ENST00000650434.1:75 ENST00000649119.1:92 ENST00000648483.1:121 ENST00000648159.1:-193 NM_001370139:-193 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-9 |
|end=74825493 | |end=74825493 | ||
|end_of_center_position=74825471 | |end_of_center_position=74825471 | ||
|entrez_id=23522 | |entrez_id=23522 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=GTPTS | + | |gene_alias=GTPTS{{!}}MORF{{!}}MOZ2{{!}}MYST4{{!}}ZC2HC6B{{!}}qkf{{!}}querkopf |
|gene_description=lysine acetyltransferase 6B | |gene_description=lysine acetyltransferase 6B | ||
|gene_id=23522 | |gene_id=23522 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:17582 | |hgnc_mgi_id=HGNC:17582 | ||
|nearest_ensembl=ENSG00000156650 | |nearest_ensembl=ENSG00000156650 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370143 |
|nearest_refseq=NM_012330 | |nearest_refseq=NM_012330 | ||
|nearest_unigene=Hs.35758 | |nearest_unigene=Hs.35758 | ||
| − | |num_trans= | + | |num_trans=18 |
|qkf= | |qkf= | ||
|querkopf= | |querkopf= | ||
| Line 33: | Line 33: | ||
|start_of_center_position=74825470 | |start_of_center_position=74825470 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000649006.1 ENST00000649463.1 NM_001370133 NM_001370134 NM_001370143 NM_001370141 NM_001370140 NM_001370138 NM_001370136 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105600.1 | |tss_id=hg_105600.1 | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74825470 |
|---|---|
| End of the center position in the TSS region: | 74825471 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000649006.1 ENST00000649463.1 NM_001370133 NM_001370134 NM_001370143 NM_001370141 NM_001370140 NM_001370138 NM_001370136 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000649006.1:0 ENST00000649463.1:0 NM_001370133:0 NM_001370134:0 NM_001370143:0 NM_001370141:0 NM_001370140:0 NM_001370138:0 NM_001370136:0 ENST00000372725.6:6 ENST00000650232.1:34 ENST00000648370.1:42 ENST00000648899.1:65 ENST00000650434.1:75 ENST00000649119.1:92 ENST00000648483.1:121 ENST00000648159.1:-193 NM_001370139:-193 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NM_001370143 |
| Entrez ID: | 23522 |
| Nearest Unigene: | Hs.35758 |
| Nearest Refseq: | NM_012330 |
| Nearest Ensembl: | ENSG00000156650 |
| Gene Name: | lysine acetyltransferase 6B |
| Gene Alias: | GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf |
| Gene Description: | lysine acetyltransferase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
