Difference between revisions of "TSS:Hg 105604.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MYST4= | |MYST4= | ||
|ZC2HC6B= | |ZC2HC6B= | ||
| − | |all_trans= | + | |all_trans=ENST00000648539.1:0 ENST00000647666.1:0 ENST00000648048.1:0 ENST00000287239.10:0 ENST00000649375.1:0 NM_001370132:0 NM_001370144:0 NM_001370142:0 NM_001370137:0 NM_001370135:0 NM_012330:0 AK074816:0 ENST00000649442.1:-11 BC014143:13 BC048199:13 AF217500:17 ENST00000650330.1:20 ENST00000650380.1:27 ENST00000372714.6:-29 ENST00000649657.1:-39 BC150618:45 LF333257:96 MA568834:96 ENST00000372724.6:-142 ENST00000647890.1:-172 ENST00000648892.1:-178 NM_001256468:-178 NM_001256469:-178 LF333256:-216 MA568833:-216 ENST00000647637.1:273 ENST00000372711.2:450 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=74826608 | |end=74826608 | ||
|end_of_center_position=74826600 | |end_of_center_position=74826600 | ||
|entrez_id=23522 | |entrez_id=23522 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| − | |gene_alias=GTPTS | + | |gene_alias=GTPTS{{!}}MORF{{!}}MOZ2{{!}}MYST4{{!}}ZC2HC6B{{!}}qkf{{!}}querkopf |
|gene_description=lysine acetyltransferase 6B | |gene_description=lysine acetyltransferase 6B | ||
|gene_id=23522 | |gene_id=23522 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:17582 | |hgnc_mgi_id=HGNC:17582 | ||
|nearest_ensembl=ENSG00000156650 | |nearest_ensembl=ENSG00000156650 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370137 |
|nearest_refseq=NM_012330 | |nearest_refseq=NM_012330 | ||
|nearest_unigene=Hs.35758 | |nearest_unigene=Hs.35758 | ||
| − | |num_trans= | + | |num_trans=32 |
|qkf= | |qkf= | ||
|querkopf= | |querkopf= | ||
| Line 33: | Line 33: | ||
|start_of_center_position=74826599 | |start_of_center_position=74826599 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000648539.1 ENST00000647666.1 ENST00000648048.1 ENST00000287239.10 ENST00000649375.1 NM_001370132 NM_001370144 NM_001370142 NM_001370137 NM_001370135 NM_012330 AK074816 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105604.1 | |tss_id=hg_105604.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q8WYB5 | + | |uniprot_id=A0A3B3ISD5 A0A3B3ISI1 A0A3B3ITP3 A0A3B3IU93 Q8WYB5 |
}} | }} | ||
Revision as of 18:18, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74826599 |
|---|---|
| End of the center position in the TSS region: | 74826600 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000648539.1 ENST00000647666.1 ENST00000648048.1 ENST00000287239.10 ENST00000649375.1 NM_001370132 NM_001370144 NM_001370142 NM_001370137 NM_001370135 NM_012330 AK074816 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000648539.1:0 ENST00000647666.1:0 ENST00000648048.1:0 ENST00000287239.10:0 ENST00000649375.1:0 NM_001370132:0 NM_001370144:0 NM_001370142:0 NM_001370137:0 NM_001370135:0 NM_012330:0 AK074816:0 ENST00000649442.1:-11 BC014143:13 BC048199:13 AF217500:17 ENST00000650330.1:20 ENST00000650380.1:27 ENST00000372714.6:-29 ENST00000649657.1:-39 BC150618:45 LF333257:96 MA568834:96 ENST00000372724.6:-142 ENST00000647890.1:-172 ENST00000648892.1:-178 NM_001256468:-178 NM_001256469:-178 LF333256:-216 MA568833:-216 ENST00000647637.1:273 ENST00000372711.2:450 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001370137 |
| Entrez ID: | 23522 |
| Nearest Unigene: | Hs.35758 |
| Nearest Refseq: | NM_012330 |
| Nearest Ensembl: | ENSG00000156650 |
| Gene Name: | lysine acetyltransferase 6B |
| Gene Alias: | GTPTS|MORF|MOZ2|MYST4|ZC2HC6B|qkf|querkopf |
| Gene Description: | lysine acetyltransferase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
