Difference between revisions of "TSS:Hg 105675.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|S24= | |S24= | ||
| − | |all_trans=ENST00000478655. | + | |all_trans=ENST00000478655.6:0 ENST00000485708.7:0 ENST00000464716.6:0 ENST00000360830.9:0 ENST00000372360.9:0 ENST00000440692.6:0 NM_001142285:0 NM_033022:0 D28424:0 AK311776:0 AK311910:0 BX537975:0 M31520:0 ENST00000645698.1:1 BX647260:1 ENST00000476545.6:4 BC071926:5 AF147330:6 BC000523:10 ENST00000466129.6:13 BC003149:14 ENST00000465692.2:18 ENST00000645440.1:-19 ENST00000475468.6:31 ENST00000482069.5:44 ENST00000435275.5:-95 ENST00000613865.5:-95 NM_001026:-95 NM_001142283:-95 NM_001142284:-95 NM_001142282:-95 ENST00000646254.1:337 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=78033873 | |end=78033873 | ||
|end_of_center_position=78033864 | |end_of_center_position=78033864 | ||
|entrez_id=6229 | |entrez_id=6229 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=DBA3 | + | |gene_alias=DBA3{{!}}S24{{!}}eS24 |
|gene_description=ribosomal protein S24 | |gene_description=ribosomal protein S24 | ||
|gene_id=6229 | |gene_id=6229 | ||
| Line 16: | Line 16: | ||
|gene_source=HGNC:10411 | |gene_source=HGNC:10411 | ||
|gene_symbol=RPS24 | |gene_symbol=RPS24 | ||
| − | |gene_synonyms=S24 | + | |gene_synonyms=S24 eS24 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:10411 | |hgnc_mgi_id=HGNC:10411 | ||
|nearest_ensembl=ENSG00000138326 | |nearest_ensembl=ENSG00000138326 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001142285 |
|nearest_refseq=NM_001026 | |nearest_refseq=NM_001026 | ||
|nearest_unigene=Hs.280130 | |nearest_unigene=Hs.280130 | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=78033854 | |start=78033854 | ||
|start_of_center_position=78033863 | |start_of_center_position=78033863 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000478655. | + | |transcript_name=ENST00000478655.6 ENST00000485708.7 ENST00000464716.6 ENST00000360830.9 ENST00000372360.9 ENST00000440692.6 NM_001142285 NM_033022 D28424 AK311776 AK311910 BX537975 M31520 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105675.1 | |tss_id=hg_105675.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A2N8M3 P62847 | + | |uniprot_id=A0A2R8Y849 A2N8M3 P62847 |
}} | }} | ||
Revision as of 18:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78033863 |
|---|---|
| End of the center position in the TSS region: | 78033864 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478655.6 ENST00000485708.7 ENST00000464716.6 ENST00000360830.9 ENST00000372360.9 ENST00000440692.6 NM_001142285 NM_033022 D28424 AK311776 AK311910 BX537975 M31520 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000478655.6:0 ENST00000485708.7:0 ENST00000464716.6:0 ENST00000360830.9:0 ENST00000372360.9:0 ENST00000440692.6:0 NM_001142285:0 NM_033022:0 D28424:0 AK311776:0 AK311910:0 BX537975:0 M31520:0 ENST00000645698.1:1 BX647260:1 ENST00000476545.6:4 BC071926:5 AF147330:6 BC000523:10 ENST00000466129.6:13 BC003149:14 ENST00000465692.2:18 ENST00000645440.1:-19 ENST00000475468.6:31 ENST00000482069.5:44 ENST00000435275.5:-95 ENST00000613865.5:-95 NM_001026:-95 NM_001142283:-95 NM_001142284:-95 NM_001142282:-95 ENST00000646254.1:337 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001142285 |
| Entrez ID: | 6229 |
| Nearest Unigene: | Hs.280130 |
| Nearest Refseq: | NM_001026 |
| Nearest Ensembl: | ENSG00000138326 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | DBA3|S24|eS24 |
| Gene Description: | ribosomal protein S24 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
