Difference between revisions of "TSS:Hg 105685.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000634452.1:0 AK126491:0 ENST00000415959 | + | |all_trans=ENST00000634452.1:0 NR_073447:0 AK126491:0 ENST00000415959.1:-9 ENST00000634735.1:-27 ENST00000461034.1:32 ENST00000476909.1:63 ENST00000459633.1:95 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=78267347 | |end=78267347 | ||
|end_of_center_position=78267342 | |end_of_center_position=78267342 | ||
| Line 11: | Line 11: | ||
|gene_alias=C10orf101 | |gene_alias=C10orf101 | ||
|gene_description=long intergenic non-protein coding RNA 595 | |gene_description=long intergenic non-protein coding RNA 595 | ||
| − | |gene_id= | + | |gene_id=414243 |
| − | |gene_name=long intergenic non-protein coding RNA 595 | + | |gene_name=long intergenic non-protein coding RNA 595 |
| − | |gene_source=HGNC:31430 | + | |gene_source=HGNC:31430 |
| − | |gene_symbol=LINC00595 | + | |gene_symbol=LINC00595 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id=HGNC:31430 | + | |hgnc_mgi_id=HGNC:31430 |
|nearest_ensembl=ENSG00000230417 | |nearest_ensembl=ENSG00000230417 | ||
|nearest_promoter_id=NR_073447 | |nearest_promoter_id=NR_073447 | ||
|nearest_refseq=NR_073447 | |nearest_refseq=NR_073447 | ||
|nearest_unigene=Hs.55047 | |nearest_unigene=Hs.55047 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=78267336 | |start=78267336 | ||
|start_of_center_position=78267341 | |start_of_center_position=78267341 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000634452.1 AK126491 | + | |transcript_name=ENST00000634452.1 NR_073447 AK126491 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_105685.1 | |tss_id=hg_105685.1 | ||
Revision as of 18:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78267341 |
|---|---|
| End of the center position in the TSS region: | 78267342 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000634452.1 NR_073447 AK126491 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000634452.1:0 NR_073447:0 AK126491:0 ENST00000415959.1:-9 ENST00000634735.1:-27 ENST00000461034.1:32 ENST00000476909.1:63 ENST00000459633.1:95 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_073447 |
| Entrez ID: | 414243 |
| Nearest Unigene: | Hs.55047 |
| Nearest Refseq: | NR_073447 |
| Nearest Ensembl: | ENSG00000230417 |
| Gene Name: | long intergenic non-protein coding RNA 595 |
| Gene Alias: | C10orf101 |
| Gene Description: | long intergenic non-protein coding RNA 595 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
