Difference between revisions of "TSS:Hg 105927.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PTD010= | |PTD010= | ||
|TMBIM5= | |TMBIM5= | ||
| − | |all_trans=AK130094:0 BC022872:0 AK225318:0 AF060923:0 AK298332:0 AK098770:0 BC010354:0 AK130097:0 AK297960:0 AK292864:0 AY358824:0 AF161400:-1 AL136713:-2 | + | |all_trans=AK130094:0 LF213794:0 MA449371:0 BC022872:0 AK225318:0 AF060923:0 AK298332:0 AK098770:0 BC010354:0 AK130097:0 AK297960:0 AK292864:0 AY358824:0 AF161400:-1 AL136713:-2 ENST00000372134.6:-12 NM_014394:-12 AF131820:-19 AF078863:-19 AK299937:-37 LF210013:-43 MA445590:-43 LF334029:326 MA569606:326 LF334028:424 MA569605:424 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=35 |
|end=84139568 | |end=84139568 | ||
|end_of_center_position=84139545 | |end_of_center_position=84139545 | ||
|entrez_id=27069 | |entrez_id=27069 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=DERP2 | + | |gene_alias=DERP2{{!}}HSPC282{{!}}MICS1{{!}}My021{{!}}PTD010{{!}}TMBIM5 |
|gene_description=growth hormone inducible transmembrane protein | |gene_description=growth hormone inducible transmembrane protein | ||
|gene_id=27069 | |gene_id=27069 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_014394 | |nearest_refseq=NM_014394 | ||
|nearest_unigene=Hs.352656 | |nearest_unigene=Hs.352656 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=84139520 | |start=84139520 | ||
|start_of_center_position=84139544 | |start_of_center_position=84139544 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK130094 BC022872 AK225318 AF060923 AK298332 AK098770 BC010354 AK130097 AK297960 AK292864 AY358824 | + | |transcript_name=AK130094 LF213794 MA449371 BC022872 AK225318 AF060923 AK298332 AK098770 BC010354 AK130097 AK297960 AK292864 AY358824 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_105927.1 | |tss_id=hg_105927.1 | ||
Revision as of 18:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 84139544 |
|---|---|
| End of the center position in the TSS region: | 84139545 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK130094 LF213794 MA449371 BC022872 AK225318 AF060923 AK298332 AK098770 BC010354 AK130097 AK297960 AK292864 AY358824 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | AK130094:0 LF213794:0 MA449371:0 BC022872:0 AK225318:0 AF060923:0 AK298332:0 AK098770:0 BC010354:0 AK130097:0 AK297960:0 AK292864:0 AY358824:0 AF161400:-1 AL136713:-2 ENST00000372134.6:-12 NM_014394:-12 AF131820:-19 AF078863:-19 AK299937:-37 LF210013:-43 MA445590:-43 LF334029:326 MA569606:326 LF334028:424 MA569605:424 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_014394 |
| Entrez ID: | 27069 |
| Nearest Unigene: | Hs.352656 |
| Nearest Refseq: | NM_014394 |
| Nearest Ensembl: | ENSG00000165678 |
| Gene Name: | growth hormone inducible transmembrane protein |
| Gene Alias: | DERP2|HSPC282|MICS1|My021|PTD010|TMBIM5 |
| Gene Description: | growth hormone inducible transmembrane protein |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
