Difference between revisions of "TSS:Hg 106152.1"
From referenceTSS
| Line 2: | Line 2: | ||
|P58= | |P58= | ||
|RI58= | |RI58= | ||
| − | |all_trans=U34605:3 AK312358:56 BC025786:-73 ENST00000371795. | + | |all_trans=U34605:3 AK312358:56 ENST00000681163.1:69 BC025786:-73 ENST00000681348.1:83 AK293346:83 ENST00000681359.1:-94 ENST00000371795.5:-94 ENST00000681422.1:-94 NM_012420:-94 LP895792:-94 ENST00000680591.1:319 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 11: | Line 11: | ||
|entrez_id=24138 | |entrez_id=24138 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=ISG58 | + | |gene_alias=ISG58{{!}}P58{{!}}RI58 |
|gene_description=interferon induced protein with tetratricopeptide repeats 5 | |gene_description=interferon induced protein with tetratricopeptide repeats 5 | ||
|gene_id=24138 | |gene_id=24138 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_012420 | |nearest_refseq=NM_012420 | ||
|nearest_unigene=Hs.252839 | |nearest_unigene=Hs.252839 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=89414661 | |start=89414661 | ||
Revision as of 18:31, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89414670 |
|---|---|
| End of the center position in the TSS region: | 89414671 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | U34605 |
|---|---|
| Distance: | 3 |
| Num_trans: | 12 |
| All_trans: | U34605:3 AK312358:56 ENST00000681163.1:69 BC025786:-73 ENST00000681348.1:83 AK293346:83 ENST00000681359.1:-94 ENST00000371795.5:-94 ENST00000681422.1:-94 NM_012420:-94 LP895792:-94 ENST00000680591.1:319 |
TATA-Box annotation
| Distance to TSS: | 102 |
|---|---|
| Nearest PromoterID: | NM_012420 |
| Entrez ID: | 24138 |
| Nearest Unigene: | Hs.252839 |
| Nearest Refseq: | NM_012420 |
| Nearest Ensembl: | ENSG00000152778 |
| Gene Name: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Alias: | ISG58|P58|RI58 |
| Gene Description: | interferon induced protein with tetratricopeptide repeats 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
