Difference between revisions of "TSS:Hg 106166.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000670043.1:-15 ENST00000448490.1:-18 AL137595:-18 ENST00000448963.5:-64 BC033541:-64 BC035398:-64 NR_038382:-81 ENST00000667153.1:-91 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance=- | + | |distance=-15 |
|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=89829579 | |end=89829579 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=89829576 | |start_of_center_position=89829576 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000670043.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106166.1 | |tss_id=hg_106166.1 | ||
Revision as of 18:31, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 89829576 |
|---|---|
| End of the center position in the TSS region: | 89829577 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000670043.1 |
|---|---|
| Distance: | -15 |
| Num_trans: | 8 |
| All_trans: | ENST00000670043.1:-15 ENST00000448490.1:-18 AL137595:-18 ENST00000448963.5:-64 BC033541:-64 BC035398:-64 NR_038382:-81 ENST00000667153.1:-91 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NR_038382 |
| Entrez ID: | 643529 |
| Nearest Unigene: | Hs.618956 |
| Nearest Refseq: | NR_038382 |
| Nearest Ensembl: | ENSG00000232229 |
| Gene Name: | long intergenic non-protein coding RNA 865 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 865 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
