Difference between revisions of "TSS:Hg 106205.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000614189.4 | + | |all_trans=ENST00000614189.4:102 NR_046435:102 NM_001257101:102 BC007377:108 BC051845:127 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:28264 | |hgnc_mgi_id=HGNC:28264 | ||
|nearest_ensembl=ENSG00000180628 | |nearest_ensembl=ENSG00000180628 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001257101 |
|nearest_refseq=NM_032373 | |nearest_refseq=NM_032373 | ||
|nearest_unigene=Hs.500512 | |nearest_unigene=Hs.500512 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=91162868 | |start=91162868 | ||
|start_of_center_position=91162889 | |start_of_center_position=91162889 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000614189.4 NM_001257101 | + | |transcript_name=ENST00000614189.4 NR_046435 NM_001257101 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106205.1 | |tss_id=hg_106205.1 | ||
Revision as of 18:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91162889 |
|---|---|
| End of the center position in the TSS region: | 91162890 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000614189.4 NR_046435 NM_001257101 |
|---|---|
| Distance: | 102 |
| Num_trans: | 5 |
| All_trans: | ENST00000614189.4:102 NR_046435:102 NM_001257101:102 BC007377:108 BC051845:127 |
TATA-Box annotation
| Distance to TSS: | -123 |
|---|---|
| Nearest PromoterID: | NM_001257101 |
| Entrez ID: | 84333 |
| Nearest Unigene: | Hs.500512 |
| Nearest Refseq: | NM_032373 |
| Nearest Ensembl: | ENSG00000180628 |
| Gene Name: | polycomb group ring finger 5 |
| Gene Alias: | RNF159 |
| Gene Description: | polycomb group ring finger 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
