Difference between revisions of "TSS:Hg 106219.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000631422.1:-436 | + | |all_trans=ENST00000631422.1:-436 NM_001348365:-481 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=-436 | |distance=-436 | ||
| − | |distance_to_tss= | + | |distance_to_tss=487 |
|end=91409729 | |end=91409729 | ||
|end_of_center_position=91409723 | |end_of_center_position=91409723 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:26736 | |hgnc_mgi_id=HGNC:26736 | ||
|nearest_ensembl=ENSG00000165338 | |nearest_ensembl=ENSG00000165338 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001348365 |
|nearest_refseq=NM_173497 | |nearest_refseq=NM_173497 | ||
|nearest_unigene=Hs.596096 | |nearest_unigene=Hs.596096 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=91409715 | |start=91409715 | ||
| Line 31: | Line 31: | ||
|tss_id=hg_106219.1 | |tss_id=hg_106219.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0J9YVV1 |
}} | }} | ||
Revision as of 18:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 91409722 |
|---|---|
| End of the center position in the TSS region: | 91409723 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000631422.1 |
|---|---|
| Distance: | -436 |
| Num_trans: | 2 |
| All_trans: | ENST00000631422.1:-436 NM_001348365:-481 |
TATA-Box annotation
| Distance to TSS: | 487 |
|---|---|
| Nearest PromoterID: | NM_001348365 |
| Entrez ID: | 143279 |
| Nearest Unigene: | Hs.596096 |
| Nearest Refseq: | NM_173497 |
| Nearest Ensembl: | ENSG00000165338 |
| Gene Name: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Alias: | - |
| Gene Description: | HECT domain E3 ubiquitin protein ligase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
