Difference between revisions of "TSS:Hg 106293.1"
From referenceTSS
| Line 2: | Line 2: | ||
|COD4= | |COD4= | ||
|PDEA2= | |PDEA2= | ||
| − | |all_trans=ENST00000371447. | + | |all_trans=ENST00000371447.4:0 NM_006204:0 U31973:46 BC111377:173 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=93612542 | |end=93612542 | ||
|end_of_center_position=93612538 | |end_of_center_position=93612538 | ||
|entrez_id=5146 | |entrez_id=5146 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=ACHM5 | + | |gene_alias=ACHM5{{!}}COD4{{!}}PDEA2 |
|gene_description=phosphodiesterase 6C | |gene_description=phosphodiesterase 6C | ||
|gene_id=5146 | |gene_id=5146 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_006204 | |nearest_refseq=NM_006204 | ||
|nearest_unigene=Hs.658121 | |nearest_unigene=Hs.658121 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=93612532 | |start=93612532 | ||
|start_of_center_position=93612537 | |start_of_center_position=93612537 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000371447. | + | |transcript_name=ENST00000371447.4 NM_006204 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106293.1 | |tss_id=hg_106293.1 | ||
Revision as of 18:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93612537 |
|---|---|
| End of the center position in the TSS region: | 93612538 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371447.4 NM_006204 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000371447.4:0 NM_006204:0 U31973:46 BC111377:173 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_006204 |
| Entrez ID: | 5146 |
| Nearest Unigene: | Hs.658121 |
| Nearest Refseq: | NM_006204 |
| Nearest Ensembl: | ENSG00000095464 |
| Gene Name: | phosphodiesterase 6C |
| Gene Alias: | ACHM5|COD4|PDEA2 |
| Gene Description: | phosphodiesterase 6C |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
