Difference between revisions of "TSS:Hg 106301.1"
From referenceTSS
| Line 2: | Line 2: | ||
|POST= | |POST= | ||
|TMEM20= | |TMEM20= | ||
| − | |all_trans= | + | |all_trans=ENST00000371408.7:0 ENST00000427197.2:0 ENST00000483386.5:0 ENST00000605679.5:0 ENST00000494992.5:0 NM_001134658:0 NR_144335:0 NM_153226:0 NM_001345993:0 NR_144337:0 NR_144336:0 AK091309:0 BC036382:0 BC058549:0 BC143283:0 BC143284:0 BC104814:0 ENST00000603665.1:14 BC047102:14 KJ895710:26 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-9 |
|end=93894008 | |end=93894008 | ||
|end_of_center_position=93893970 | |end_of_center_position=93893970 | ||
|entrez_id=159371 | |entrez_id=159371 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=C10orf60 | + | |gene_alias=C10orf60{{!}}POST{{!}}TMEM20 |
|gene_description=solute carrier family 35 member G1 | |gene_description=solute carrier family 35 member G1 | ||
|gene_id=159371 | |gene_id=159371 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_153226 | |nearest_refseq=NM_153226 | ||
|nearest_unigene=Hs.632085 | |nearest_unigene=Hs.632085 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=93893930 | |start=93893930 | ||
|start_of_center_position=93893969 | |start_of_center_position=93893969 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000371408.7 ENST00000427197.2 ENST00000483386.5 ENST00000605679.5 ENST00000494992.5 NM_001134658 NR_144335 NM_153226 NM_001345993 NR_144337 NR_144336 AK091309 BC036382 BC058549 BC143283 BC143284 BC104814 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106301.1 | |tss_id=hg_106301.1 | ||
Revision as of 18:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93893969 |
|---|---|
| End of the center position in the TSS region: | 93893970 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371408.7 ENST00000427197.2 ENST00000483386.5 ENST00000605679.5 ENST00000494992.5 NM_001134658 NR_144335 NM_153226 NM_001345993 NR_144337 NR_144336 AK091309 BC036382 BC058549 BC143283 BC143284 BC104814 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000371408.7:0 ENST00000427197.2:0 ENST00000483386.5:0 ENST00000605679.5:0 ENST00000494992.5:0 NM_001134658:0 NR_144335:0 NM_153226:0 NM_001345993:0 NR_144337:0 NR_144336:0 AK091309:0 BC036382:0 BC058549:0 BC143283:0 BC143284:0 BC104814:0 ENST00000603665.1:14 BC047102:14 KJ895710:26 |
TATA-Box annotation
| Distance to TSS: | -9 |
|---|---|
| Nearest PromoterID: | NR_144336 |
| Entrez ID: | 159371 |
| Nearest Unigene: | Hs.632085 |
| Nearest Refseq: | NM_153226 |
| Nearest Ensembl: | ENSG00000176273 |
| Gene Name: | solute carrier family 35 member G1 |
| Gene Alias: | C10orf60|POST|TMEM20 |
| Gene Description: | solute carrier family 35 member G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
