Difference between revisions of "TSS:Hg 106302.1"
From referenceTSS
| Line 2: | Line 2: | ||
|POST= | |POST= | ||
|TMEM20= | |TMEM20= | ||
| − | |all_trans=ENST00000603665 | + | |all_trans=ENST00000603665.1:0 BC047102:0 KJ895710:6 BC104814:-8 ENST00000494992.5:-10 BC143283:-10 BC143284:-10 ENST00000605679.5:-11 BC058549:-11 ENST00000483386.5:-21 BC036382:-21 ENST00000427197.2:-34 NM_001134658:-34 NR_144335:-34 NM_153226:-34 NM_001345993:-34 NR_144337:-34 NR_144336:-34 ENST00000371408.7:-39 AK091309:-39 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=42 |
|end=93894028 | |end=93894028 | ||
|end_of_center_position=93894020 | |end_of_center_position=93894020 | ||
|entrez_id=159371 | |entrez_id=159371 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=C10orf60 | + | |gene_alias=C10orf60{{!}}POST{{!}}TMEM20 |
|gene_description=solute carrier family 35 member G1 | |gene_description=solute carrier family 35 member G1 | ||
|gene_id=159371 | |gene_id=159371 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:26607 | |hgnc_mgi_id=HGNC:26607 | ||
|nearest_ensembl=ENSG00000176273 | |nearest_ensembl=ENSG00000176273 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_153226 |
|nearest_refseq=NM_153226 | |nearest_refseq=NM_153226 | ||
|nearest_unigene=Hs.632085 | |nearest_unigene=Hs.632085 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=93894011 | |start=93894011 | ||
|start_of_center_position=93894019 | |start_of_center_position=93894019 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000603665 | + | |transcript_name=ENST00000603665.1 BC047102 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106302.1 | |tss_id=hg_106302.1 | ||
Revision as of 18:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 93894019 |
|---|---|
| End of the center position in the TSS region: | 93894020 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000603665.1 BC047102 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000603665.1:0 BC047102:0 KJ895710:6 BC104814:-8 ENST00000494992.5:-10 BC143283:-10 BC143284:-10 ENST00000605679.5:-11 BC058549:-11 ENST00000483386.5:-21 BC036382:-21 ENST00000427197.2:-34 NM_001134658:-34 NR_144335:-34 NM_153226:-34 NM_001345993:-34 NR_144337:-34 NR_144336:-34 ENST00000371408.7:-39 AK091309:-39 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_153226 |
| Entrez ID: | 159371 |
| Nearest Unigene: | Hs.632085 |
| Nearest Refseq: | NM_153226 |
| Nearest Ensembl: | ENSG00000176273 |
| Gene Name: | solute carrier family 35 member G1 |
| Gene Alias: | C10orf60|POST|TMEM20 |
| Gene Description: | solute carrier family 35 member G1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
