Difference between revisions of "TSS:Hg 106336.1"
From referenceTSS
| Line 4: | Line 4: | ||
|P450-6B/29C= | |P450-6B/29C= | ||
|P450IIC17= | |P450IIC17= | ||
| − | |all_trans= | + | |all_trans=M61856:161 BC069666:166 ENST00000285979.11:269 NM_001128925:269 NM_000772:269 ENST00000339022.6:315 BC096257:315 BC096258:315 BC096259:315 BC096260:315 M61853:318 AK313403:335 AK223510:335 CU686960:360 HQ447473:360 KJ891015:360 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=161 |
| − | |distance_to_tss=- | + | |distance_to_tss=-275 |
|end=94683460 | |end=94683460 | ||
|end_of_center_position=94683454 | |end_of_center_position=94683454 | ||
|entrez_id=1562 | |entrez_id=1562 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=CPCI | + | |gene_alias=CPCI{{!}}CYP2C{{!}}CYP2C17{{!}}P450-6B/29C{{!}}P450IIC17 |
|gene_description=cytochrome P450 family 2 subfamily C member 18 | |gene_description=cytochrome P450 family 2 subfamily C member 18 | ||
|gene_id=1562 | |gene_id=1562 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_000772 | |nearest_refseq=NM_000772 | ||
|nearest_unigene=Hs.511872 | |nearest_unigene=Hs.511872 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=94683447 | |start=94683447 | ||
|start_of_center_position=94683453 | |start_of_center_position=94683453 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=M61856 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106336.1 | |tss_id=hg_106336.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:35, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 94683453 |
|---|---|
| End of the center position in the TSS region: | 94683454 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M61856 |
|---|---|
| Distance: | 161 |
| Num_trans: | 16 |
| All_trans: | M61856:161 BC069666:166 ENST00000285979.11:269 NM_001128925:269 NM_000772:269 ENST00000339022.6:315 BC096257:315 BC096258:315 BC096259:315 BC096260:315 M61853:318 AK313403:335 AK223510:335 CU686960:360 HQ447473:360 KJ891015:360 |
TATA-Box annotation
| Distance to TSS: | -275 |
|---|---|
| Nearest PromoterID: | NM_001128925 |
| Entrez ID: | 1562 |
| Nearest Unigene: | Hs.511872 |
| Nearest Refseq: | NM_000772 |
| Nearest Ensembl: | ENSG00000108242 |
| Gene Name: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Alias: | CPCI|CYP2C|CYP2C17|P450-6B/29C|P450IIC17 |
| Gene Description: | cytochrome P450 family 2 subfamily C member 18 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
