Difference between revisions of "TSS:Hg 106354.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000327739.7:-33 ENST00000341686.7:-33 NM_207321 | + | |all_trans=ENST00000327739.7:-33 ENST00000341686.7:-33 NM_207321:-33 AK126134:-33 ENST00000404473.6:235 ENST00000394005.3:235 BC104210:235 BC104211:235 BC112988:235 BC148184:235 |
|bA310E22.3= | |bA310E22.3= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 10: | Line 10: | ||
|entrez_id=142827 | |entrez_id=142827 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=C10orf129 | + | |gene_alias=C10orf129{{!}}bA310E22.3 |
| − | |gene_description=acyl-CoA synthetase medium | + | |gene_description=acyl-CoA synthetase medium chain family member 6 |
|gene_id=142827 | |gene_id=142827 | ||
| − | |gene_name=acyl-CoA synthetase medium | + | |gene_name=acyl-CoA synthetase medium chain family member 6 |
|gene_source=HGNC:31665 | |gene_source=HGNC:31665 | ||
|gene_symbol=ACSM6 | |gene_symbol=ACSM6 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_207321 | |nearest_refseq=NM_207321 | ||
|nearest_unigene=Hs.134229 | |nearest_unigene=Hs.134229 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=95194232 | |start=95194232 | ||
|start_of_center_position=95194237 | |start_of_center_position=95194237 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(AACTATAAGAGG,-,0.00) |
| − | |transcript_name=ENST00000327739.7 ENST00000341686.7 NM_207321 | + | |transcript_name=ENST00000327739.7 ENST00000341686.7 NM_207321 AK126134 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_106354.1 | |tss_id=hg_106354.1 | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 95194237 |
|---|---|
| End of the center position in the TSS region: | 95194238 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000327739.7 ENST00000341686.7 NM_207321 AK126134 |
|---|---|
| Distance: | -33 |
| Num_trans: | 10 |
| All_trans: | ENST00000327739.7:-33 ENST00000341686.7:-33 NM_207321:-33 AK126134:-33 ENST00000404473.6:235 ENST00000394005.3:235 BC104210:235 BC104211:235 BC112988:235 BC148184:235 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_207321 |
| Entrez ID: | 142827 |
| Nearest Unigene: | Hs.134229 |
| Nearest Refseq: | NM_207321 |
| Nearest Ensembl: | ENSG00000173124 |
| Gene Name: | acyl-CoA synthetase medium chain family member 6 |
| Gene Alias: | C10orf129|bA310E22.3 |
| Gene Description: | acyl-CoA synthetase medium chain family member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(AACTATAAGAGG,-,0.00) |
