Difference between revisions of "TSS:Hg 106363.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NTPDase-1= | |NTPDase-1= | ||
|SPG64= | |SPG64= | ||
| − | |all_trans=AK301459:0 ENST00000371207.8:-1 | + | |all_trans=AK301459:0 ENST00000371207.8:-1 NM_001312654:-1 NM_001164181:-1 NM_001164178:-1 NM_001320916:-1 AK298648:42 ENST00000635677.1:62 AK316009:62 ENST00000543964.6:67 AK098278:111 ENST00000483213.6:474 AK304018:474 ENST00000639992.1:477 AK304836:477 ENST00000371205.5:478 NM_001164183:478 NM_001164179:478 NM_001776:478 NM_001164182:478 S73813:488 ENST00000635076.1:494 BC047664:494 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 12: | Line 12: | ||
|entrez_id=953 | |entrez_id=953 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=ATPDase | + | |gene_alias=ATPDase{{!}}CD39{{!}}NTPDase-1{{!}}SPG64 |
|gene_description=ectonucleoside triphosphate diphosphohydrolase 1 | |gene_description=ectonucleoside triphosphate diphosphohydrolase 1 | ||
|gene_id=953 | |gene_id=953 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:3363 | |hgnc_mgi_id=HGNC:3363 | ||
|nearest_ensembl=ENSG00000138185 | |nearest_ensembl=ENSG00000138185 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164178 |
|nearest_refseq=NM_001776 | |nearest_refseq=NM_001776 | ||
|nearest_unigene=Hs.576612 | |nearest_unigene=Hs.576612 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=95755652 | |start=95755652 | ||
|start_of_center_position=95755668 | |start_of_center_position=95755668 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=40(GGCTTTATGGGG,-,0.00) |
|transcript_name=AK301459 | |transcript_name=AK301459 | ||
|tss_classification=yes | |tss_classification=yes | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 95755668 |
|---|---|
| End of the center position in the TSS region: | 95755669 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK301459 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | AK301459:0 ENST00000371207.8:-1 NM_001312654:-1 NM_001164181:-1 NM_001164178:-1 NM_001320916:-1 AK298648:42 ENST00000635677.1:62 AK316009:62 ENST00000543964.6:67 AK098278:111 ENST00000483213.6:474 AK304018:474 ENST00000639992.1:477 AK304836:477 ENST00000371205.5:478 NM_001164183:478 NM_001164179:478 NM_001776:478 NM_001164182:478 S73813:488 ENST00000635076.1:494 BC047664:494 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_001164178 |
| Entrez ID: | 953 |
| Nearest Unigene: | Hs.576612 |
| Nearest Refseq: | NM_001776 |
| Nearest Ensembl: | ENSG00000138185 |
| Gene Name: | ectonucleoside triphosphate diphosphohydrolase 1 |
| Gene Alias: | ATPDase|CD39|NTPDase-1|SPG64 |
| Gene Description: | ectonucleoside triphosphate diphosphohydrolase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 40(GGCTTTATGGGG,-,0.00) |
