Difference between revisions of "TSS:Hg 106369.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NTPDase-1= | |NTPDase-1= | ||
|SPG64= | |SPG64= | ||
| − | |all_trans=U87967:-374 ENST00000635076.1:-405 BC047664:-405 | + | |all_trans=U87967:-374 ENST00000635076.1:-405 BC047664:-405 S73813:-411 ENST00000371205.5:-421 NM_001164183:-421 NM_001164179:-421 NM_001776:-421 NM_001164182:-421 ENST00000639992.1:-422 AK304836:-422 ENST00000483213.6:-425 AK304018:-425 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-374 | |distance=-374 | ||
| − | |distance_to_tss= | + | |distance_to_tss=425 |
|end=95756593 | |end=95756593 | ||
|end_of_center_position=95756589 | |end_of_center_position=95756589 | ||
|entrez_id=953 | |entrez_id=953 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=ATPDase | + | |gene_alias=ATPDase{{!}}CD39{{!}}NTPDase-1{{!}}SPG64 |
|gene_description=ectonucleoside triphosphate diphosphohydrolase 1 | |gene_description=ectonucleoside triphosphate diphosphohydrolase 1 | ||
|gene_id=953 | |gene_id=953 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:3363 | |hgnc_mgi_id=HGNC:3363 | ||
|nearest_ensembl=ENSG00000138185 | |nearest_ensembl=ENSG00000138185 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001164183 |
|nearest_refseq=NM_001776 | |nearest_refseq=NM_001776 | ||
|nearest_unigene=Hs.576612 | |nearest_unigene=Hs.576612 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=95756583 | |start=95756583 | ||
|start_of_center_position=95756588 | |start_of_center_position=95756588 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-65(TTTTTTAGAGGC,+,0.00),-30(CAGTTTAAGAGG,-,0.00) |
|transcript_name=U87967 | |transcript_name=U87967 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 18:36, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 95756588 |
|---|---|
| End of the center position in the TSS region: | 95756589 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | U87967 |
|---|---|
| Distance: | -374 |
| Num_trans: | 13 |
| All_trans: | U87967:-374 ENST00000635076.1:-405 BC047664:-405 S73813:-411 ENST00000371205.5:-421 NM_001164183:-421 NM_001164179:-421 NM_001776:-421 NM_001164182:-421 ENST00000639992.1:-422 AK304836:-422 ENST00000483213.6:-425 AK304018:-425 |
TATA-Box annotation
| Distance to TSS: | 425 |
|---|---|
| Nearest PromoterID: | NM_001164183 |
| Entrez ID: | 953 |
| Nearest Unigene: | Hs.576612 |
| Nearest Refseq: | NM_001776 |
| Nearest Ensembl: | ENSG00000138185 |
| Gene Name: | ectonucleoside triphosphate diphosphohydrolase 1 |
| Gene Alias: | ATPDase|CD39|NTPDase-1|SPG64 |
| Gene Description: | ectonucleoside triphosphate diphosphohydrolase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -65(TTTTTTAGAGGC,+,0.00),-30(CAGTTTAAGAGG,-,0.00) |
