Difference between revisions of "TSS:Hg 106445.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000455090.1:0 | + | |all_trans=ENST00000370655.6:0 ENST00000455090.1:0 NM_001291219:0 NM_001346793:0 AK314763:0 AJ304805:0 BC020817:0 AB058599:0 KJ898619:-66 AJ249975:69 BC107759:-231 NM_001129981:-270 NM_020349:-270 ENST00000307518.9:-274 ENST00000298808.9:-274 AK056990:-274 NM_001291218:-332 AJ583444:-332 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=97572786 | |end=97572786 | ||
|end_of_center_position=97572780 | |end_of_center_position=97572780 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:495 | |hgnc_mgi_id=HGNC:495 | ||
|nearest_ensembl=ENSG00000165887 | |nearest_ensembl=ENSG00000165887 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001346793 |
|nearest_refseq=NM_020349 | |nearest_refseq=NM_020349 | ||
|nearest_unigene=Hs.73708 | |nearest_unigene=Hs.73708 | ||
| − | |num_trans= | + | |num_trans=18 |
|species=human | |species=human | ||
|start=97572772 | |start=97572772 | ||
|start_of_center_position=97572779 | |start_of_center_position=97572779 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-32(GCCTATAAAGCC,+,0.00) |
| − | |transcript_name=ENST00000455090.1 | + | |transcript_name=ENST00000370655.6 ENST00000455090.1 NM_001291219 NM_001346793 AK314763 AJ304805 BC020817 AB058599 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106445.1 | |tss_id=hg_106445.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B2RBQ4 Q5T457 | + | |uniprot_id=A0A0A0MRN9 B2RBQ4 Q5T457 Q9GZV1 |
}} | }} | ||
Revision as of 18:38, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97572779 |
|---|---|
| End of the center position in the TSS region: | 97572780 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370655.6 ENST00000455090.1 NM_001291219 NM_001346793 AK314763 AJ304805 BC020817 AB058599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000370655.6:0 ENST00000455090.1:0 NM_001291219:0 NM_001346793:0 AK314763:0 AJ304805:0 BC020817:0 AB058599:0 KJ898619:-66 AJ249975:69 BC107759:-231 NM_001129981:-270 NM_020349:-270 ENST00000307518.9:-274 ENST00000298808.9:-274 AK056990:-274 NM_001291218:-332 AJ583444:-332 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001346793 |
| Entrez ID: | 26287 |
| Nearest Unigene: | Hs.73708 |
| Nearest Refseq: | NM_020349 |
| Nearest Ensembl: | ENSG00000165887 |
| Gene Name: | ankyrin repeat domain 2 |
| Gene Alias: | ARPP |
| Gene Description: | ankyrin repeat domain 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCCTATAAAGCC,+,0.00) |
