Difference between revisions of "TSS:Hg 106454.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000370640. | + | |all_trans=ENST00000370640.5:0 NM_001009997:0 BC037252:0 AM393183:-111 AM393504:-111 AM393165:-111 AM393792:-111 AM393789:170 AM393790:170 AM392556:170 AM392795:170 AB464495:170 KJ900755:170 BC043281:-462 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-3 |
|end=97589727 | |end=97589727 | ||
|end_of_center_position=97589718 | |end_of_center_position=97589718 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001009997 | |nearest_refseq=NM_001009997 | ||
|nearest_unigene=Hs.662302 | |nearest_unigene=Hs.662302 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=97589708 | |start=97589708 | ||
|start_of_center_position=97589717 | |start_of_center_position=97589717 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000370640. | + | |transcript_name=ENST00000370640.5 NM_001009997 BC037252 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106454.1 | |tss_id=hg_106454.1 | ||
Revision as of 18:38, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97589717 |
|---|---|
| End of the center position in the TSS region: | 97589718 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370640.5 NM_001009997 BC037252 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000370640.5:0 NM_001009997:0 BC037252:0 AM393183:-111 AM393504:-111 AM393165:-111 AM393792:-111 AM393789:170 AM393790:170 AM392556:170 AM392795:170 AB464495:170 KJ900755:170 BC043281:-462 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001009997 |
| Entrez ID: | 414157 |
| Nearest Unigene: | Hs.662302 |
| Nearest Refseq: | NM_001009997 |
| Nearest Ensembl: | ENSG00000203942 |
| Gene Name: | chromosome 10 open reading frame 62 |
| Gene Alias: | bA548K23.1 |
| Gene Description: | chromosome 10 open reading frame 62 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
