Difference between revisions of "TSS:Hg 106476.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000370602.6:162 NM_001010917:162 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=162 |
|distance_to_tss=136 | |distance_to_tss=136 | ||
|end=97849681 | |end=97849681 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 866 | |gene_description=long intergenic non-protein coding RNA 866 | ||
| − | |gene_name= | + | |gene_id=401647 |
| + | |gene_name=golgin A7 family member B | ||
| + | |gene_source=HGNC:31668 | ||
| + | |gene_symbol=GOLGA7B | ||
| + | |gene_synonyms=bA451M19.3 bA459F3.4 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:31668 | ||
|nearest_ensembl=ENSG00000227356 | |nearest_ensembl=ENSG00000227356 | ||
|nearest_promoter_id=NR_108035 | |nearest_promoter_id=NR_108035 | ||
|nearest_refseq=NR_108035 | |nearest_refseq=NR_108035 | ||
|nearest_unigene=Hs.351904 | |nearest_unigene=Hs.351904 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=97849642 | |start=97849642 | ||
|start_of_center_position=97849661 | |start_of_center_position=97849661 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000370602.6 NM_001010917 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106476.1 | |tss_id=hg_106476.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q2TAP0 Q6ZUQ1 | ||
}} | }} | ||
Revision as of 18:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97849661 |
|---|---|
| End of the center position in the TSS region: | 97849662 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000370602.6 NM_001010917 |
|---|---|
| Distance: | 162 |
| Num_trans: | 2 |
| All_trans: | ENST00000370602.6:162 NM_001010917:162 |
TATA-Box annotation
| Distance to TSS: | 136 |
|---|---|
| Nearest PromoterID: | NR_108035 |
| Entrez ID: | 100505561 |
| Nearest Unigene: | Hs.351904 |
| Nearest Refseq: | NR_108035 |
| Nearest Ensembl: | ENSG00000227356 |
| Gene Name: | golgin A7 family member B |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 866 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
