Difference between revisions of "TSS:Hg 106500.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000370489. | + | |all_trans=ENST00000370489.5:0 NM_020354:0 NM_001349962:0 AK314542:0 AK309735:0 AK055540:0 BC119008:0 BC122857:0 AF269255:0 NM_001349963:73 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-16 |
|end=99659556 | |end=99659556 | ||
|end_of_center_position=99659494 | |end_of_center_position=99659494 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_020354 | |nearest_refseq=NM_020354 | ||
|nearest_unigene=Hs.28326 | |nearest_unigene=Hs.28326 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=99659430 | |start=99659430 | ||
|start_of_center_position=99659493 | |start_of_center_position=99659493 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000370489. | + | |transcript_name=ENST00000370489.5 NM_020354 NM_001349962 AK314542 AK309735 AK055540 BC119008 BC122857 AF269255 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106500.1 | |tss_id=hg_106500.1 | ||
Revision as of 18:39, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 99659493 |
|---|---|
| End of the center position in the TSS region: | 99659494 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000370489.5 NM_020354 NM_001349962 AK314542 AK309735 AK055540 BC119008 BC122857 AF269255 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000370489.5:0 NM_020354:0 NM_001349962:0 AK314542:0 AK309735:0 AK055540:0 BC119008:0 BC122857:0 AF269255:0 NM_001349963:73 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_020354 |
| Entrez ID: | 57089 |
| Nearest Unigene: | Hs.28326 |
| Nearest Refseq: | NM_020354 |
| Nearest Ensembl: | ENSG00000198018 |
| Gene Name: | ectonucleoside triphosphate diphosphohydrolase 7 |
| Gene Alias: | LALP1 |
| Gene Description: | ectonucleoside triphosphate diphosphohydrolase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
