Difference between revisions of "TSS:Hg 106679.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000299238. | + | |all_trans=ENST00000299238.7:0 NM_024747:0 BC014993:0 AF536238:0 BC011594:0 KJ894735:43 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=BLOC2S3 | |gene_alias=BLOC2S3 | ||
| − | |gene_description= | + | |gene_description=HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 |
|gene_id=79803 | |gene_id=79803 | ||
| − | |gene_name= | + | |gene_name=HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 |
|gene_source=HGNC:18817 | |gene_source=HGNC:18817 | ||
|gene_symbol=HPS6 | |gene_symbol=HPS6 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_024747 | |nearest_refseq=NM_024747 | ||
|nearest_unigene=Hs.125133 | |nearest_unigene=Hs.125133 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=102065323 | |start=102065323 | ||
|start_of_center_position=102065377 | |start_of_center_position=102065377 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000299238. | + | |transcript_name=ENST00000299238.7 NM_024747 BC014993 AF536238 BC011594 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_106679.1 | |tss_id=hg_106679.1 | ||
Revision as of 18:43, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102065377 |
|---|---|
| End of the center position in the TSS region: | 102065378 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000299238.7 NM_024747 BC014993 AF536238 BC011594 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000299238.7:0 NM_024747:0 BC014993:0 AF536238:0 BC011594:0 KJ894735:43 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_024747 |
| Entrez ID: | 79803 |
| Nearest Unigene: | Hs.125133 |
| Nearest Refseq: | NM_024747 |
| Nearest Ensembl: | ENSG00000166189 |
| Gene Name: | HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 |
| Gene Alias: | BLOC2S3 |
| Gene Description: | HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
