Difference between revisions of "TSS:Hg 107445.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK314660:11 ENST00000494222.5:16 ENST00000368990.7:16 | + | |all_trans=AK314660:11 ENST00000494222.5:16 ENST00000368990.7:16 BC001136:24 NM_001377249:28 NM_001377250:28 NM_001377235:28 NM_001377234:28 NM_001377232:28 NM_001377231:28 NM_001377242:28 NM_001377248:28 NM_001377247:28 NM_001377246:28 NM_001377245:28 NM_001377244:28 NM_001377243:28 NM_001001974:28 NM_001377241:28 NM_001377240:28 NM_001377258:28 NM_001377257:28 NM_001377256:28 NM_001377255:28 NM_001377254:28 NM_001377253:28 NM_001377252:28 NM_001377251:28 NM_001330178:28 NM_001377238:28 NM_001377237:28 NM_001377230:28 NM_021622:28 NR_165160:28 NR_165161:28 NR_165162:28 NR_165164:28 NR_165165:28 ENST00000368989.6:80 ENST00000463663.6:154 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=11 | |distance=11 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-48 |
|end=122374680 | |end=122374680 | ||
|end_of_center_position=122374660 | |end_of_center_position=122374660 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_021622 | |nearest_refseq=NM_021622 | ||
|nearest_unigene=Hs.643512 | |nearest_unigene=Hs.643512 | ||
| − | |num_trans= | + | |num_trans=40 |
|species=human | |species=human | ||
|start=122374639 | |start=122374639 | ||
Revision as of 19:01, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 122374659 |
|---|---|
| End of the center position in the TSS region: | 122374660 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK314660 |
|---|---|
| Distance: | 11 |
| Num_trans: | 40 |
| All_trans: | AK314660:11 ENST00000494222.5:16 ENST00000368990.7:16 BC001136:24 NM_001377249:28 NM_001377250:28 NM_001377235:28 NM_001377234:28 NM_001377232:28 NM_001377231:28 NM_001377242:28 NM_001377248:28 NM_001377247:28 NM_001377246:28 NM_001377245:28 NM_001377244:28 NM_001377243:28 NM_001001974:28 NM_001377241:28 NM_001377240:28 NM_001377258:28 NM_001377257:28 NM_001377256:28 NM_001377255:28 NM_001377254:28 NM_001377253:28 NM_001377252:28 NM_001377251:28 NM_001330178:28 NM_001377238:28 NM_001377237:28 NM_001377230:28 NM_021622:28 NR_165160:28 NR_165161:28 NR_165162:28 NR_165164:28 NR_165165:28 ENST00000368989.6:80 ENST00000463663.6:154 |
TATA-Box annotation
| Distance to TSS: | -48 |
|---|---|
| Nearest PromoterID: | NM_001330178 |
| Entrez ID: | 59338 |
| Nearest Unigene: | Hs.643512 |
| Nearest Refseq: | NM_021622 |
| Nearest Ensembl: | ENSG00000107679 |
| Gene Name: | pleckstrin homology domain containing A1 |
| Gene Alias: | TAPP1 |
| Gene Description: | pleckstrin homology domain containing A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
