Difference between revisions of "TSS:Hg 107651.1"
From referenceTSS
Line 2: | Line 2: | ||
|PTPE= | |PTPE= | ||
|R-PTP-EPSILON= | |R-PTP-EPSILON= | ||
− | |all_trans=ENST00000306042.9:0 | + | |all_trans=ENST00000306042.9:0 BC071573:12 NM_001323357:13 NM_130435:13 U36623:14 AK290414:14 BX648180:-17 ENST00000487428.1:20 ENST00000495530.5:30 ENST00000479896.1:32 AJ430580:32 AJ315969:41 ENST00000467366.1:-154 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
− | |distance_to_tss= | + | |distance_to_tss=-33 |
|end=128047599 | |end=128047599 | ||
|end_of_center_position=128047580 | |end_of_center_position=128047580 | ||
|entrez_id=5791 | |entrez_id=5791 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
− | |gene_alias=HPTPE | + | |gene_alias=HPTPE{{!}}PTPE{{!}}R-PTP-EPSILON |
− | |gene_description= | + | |gene_description=protein tyrosine phosphatase receptor type E |
|gene_id=5791 | |gene_id=5791 | ||
− | |gene_name= | + | |gene_name=protein tyrosine phosphatase receptor type E |
|gene_source=HGNC:9669 | |gene_source=HGNC:9669 | ||
|gene_symbol=PTPRE | |gene_symbol=PTPRE | ||
Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:9669 | |hgnc_mgi_id=HGNC:9669 | ||
|nearest_ensembl=ENSG00000132334 | |nearest_ensembl=ENSG00000132334 | ||
− | |nearest_promoter_id= | + | |nearest_promoter_id=NM_130435 |
|nearest_refseq=NM_006504 | |nearest_refseq=NM_006504 | ||
|nearest_unigene=Hs.127022 | |nearest_unigene=Hs.127022 | ||
− | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=128047559 | |start=128047559 | ||
|start_of_center_position=128047579 | |start_of_center_position=128047579 | ||
|strand=+ | |strand=+ | ||
− | |transcript_name=ENST00000306042.9 | + | |transcript_name=ENST00000306042.9 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_107651.1 | |tss_id=hg_107651.1 |
Revision as of 19:06, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 128047579 |
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End of the center position in the TSS region: | 128047580 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000306042.9 |
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Distance: | 0 |
Num_trans: | 13 |
All_trans: | ENST00000306042.9:0 BC071573:12 NM_001323357:13 NM_130435:13 U36623:14 AK290414:14 BX648180:-17 ENST00000487428.1:20 ENST00000495530.5:30 ENST00000479896.1:32 AJ430580:32 AJ315969:41 ENST00000467366.1:-154 |
TATA-Box annotation
Distance to TSS: | -33 |
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Nearest PromoterID: | NM_130435 |
Entrez ID: | 5791 |
Nearest Unigene: | Hs.127022 |
Nearest Refseq: | NM_006504 |
Nearest Ensembl: | ENSG00000132334 |
Gene Name: | protein tyrosine phosphatase receptor type E |
Gene Alias: | HPTPE|PTPE|R-PTP-EPSILON |
Gene Description: | protein tyrosine phosphatase receptor type E |
Gene Type: | protein-coding |
CpG%: | 0.025 |
GC%: | 0.616915 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |