Difference between revisions of "TSS:Hg 110128.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000487653.1:-200 | + | |all_trans=ENST00000487653.1:-200 BC067127:-204 AK315597:-237 AK026983:-263 ENST00000355264.9:-271 NM_001320265:-271 NR_135191:-271 NM_012095:-271 NM_001320264:-271 NM_001320263:-271 NM_207012:-271 AK299352:-279 ENST00000372745.1:-285 BC026232:-285 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=-200 | |distance=-200 | ||
| − | |distance_to_tss= | + | |distance_to_tss=278 |
|end=74150557 | |end=74150557 | ||
|end_of_center_position=74150551 | |end_of_center_position=74150551 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=adaptor related protein complex 3 mu 1 | + | |gene_description=adaptor related protein complex 3 subunit mu 1 |
|gene_id=26985 | |gene_id=26985 | ||
| − | |gene_name=adaptor related protein complex 3 mu 1 | + | |gene_name=adaptor related protein complex 3 subunit mu 1 |
|gene_source=HGNC:569 | |gene_source=HGNC:569 | ||
|gene_symbol=AP3M1 | |gene_symbol=AP3M1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_012095 | |nearest_refseq=NM_012095 | ||
|nearest_unigene=Hs.500104 | |nearest_unigene=Hs.500104 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=74150543 | |start=74150543 | ||
|start_of_center_position=74150550 | |start_of_center_position=74150550 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000487653 | + | |transcript_name=ENST00000487653.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_110128.1 | |tss_id=hg_110128.1 | ||
Revision as of 20:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74150550 |
|---|---|
| End of the center position in the TSS region: | 74150551 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000487653.1 |
|---|---|
| Distance: | -200 |
| Num_trans: | 14 |
| All_trans: | ENST00000487653.1:-200 BC067127:-204 AK315597:-237 AK026983:-263 ENST00000355264.9:-271 NM_001320265:-271 NR_135191:-271 NM_012095:-271 NM_001320264:-271 NM_001320263:-271 NM_207012:-271 AK299352:-279 ENST00000372745.1:-285 BC026232:-285 |
TATA-Box annotation
| Distance to TSS: | 278 |
|---|---|
| Nearest PromoterID: | NM_001320264 |
| Entrez ID: | 26985 |
| Nearest Unigene: | Hs.500104 |
| Nearest Refseq: | NM_012095 |
| Nearest Ensembl: | ENSG00000185009 |
| Gene Name: | adaptor related protein complex 3 subunit mu 1 |
| Gene Alias: | - |
| Gene Description: | adaptor related protein complex 3 subunit mu 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
