Difference between revisions of "TSS:Hg 111671.1"
From referenceTSS
| Line 3: | Line 3: | ||
|P167= | |P167= | ||
|TIF32= | |TIF32= | ||
| − | |all_trans=U78311:0 BC054342:0 BC033769:0 U58046:7 AK307610:-9 | + | |all_trans=U78311:0 BC054342:0 BC033769:0 U58046:7 AK307610:-9 D50929:-13 BC064926:-15 BC107776:-19 AK309542:-24 ENST00000369144.8:-26 NM_003750:-26 LP895213:-31 ENST00000541549.2:-32 JX312508:-32 BC114429:51 LF346032:103 MA581609:103 AB383762:105 AK302575:262 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=31 |
|eIF3-p170= | |eIF3-p170= | ||
|eIF3-theta= | |eIF3-theta= | ||
| Line 14: | Line 14: | ||
|entrez_id=8661 | |entrez_id=8661 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=EIF3 | + | |gene_alias=EIF3{{!}}EIF3S10{{!}}P167{{!}}TIF32{{!}}eIF3-p170{{!}}eIF3-theta{{!}}p180{{!}}p185 |
|gene_description=eukaryotic translation initiation factor 3 subunit A | |gene_description=eukaryotic translation initiation factor 3 subunit A | ||
|gene_id=8661 | |gene_id=8661 | ||
| Line 20: | Line 20: | ||
|gene_source=HGNC:3271 | |gene_source=HGNC:3271 | ||
|gene_symbol=EIF3A | |gene_symbol=EIF3A | ||
| − | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta | + | |gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:3271 | |hgnc_mgi_id=HGNC:3271 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_003750 | |nearest_refseq=NM_003750 | ||
|nearest_unigene=Hs.523299 | |nearest_unigene=Hs.523299 | ||
| − | |num_trans= | + | |num_trans=19 |
|p180= | |p180= | ||
|p185= | |p185= | ||
Revision as of 20:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 119080785 |
|---|---|
| End of the center position in the TSS region: | 119080786 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | U78311 BC054342 BC033769 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | U78311:0 BC054342:0 BC033769:0 U58046:7 AK307610:-9 D50929:-13 BC064926:-15 BC107776:-19 AK309542:-24 ENST00000369144.8:-26 NM_003750:-26 LP895213:-31 ENST00000541549.2:-32 JX312508:-32 BC114429:51 LF346032:103 MA581609:103 AB383762:105 AK302575:262 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_003750 |
| Entrez ID: | 8661 |
| Nearest Unigene: | Hs.523299 |
| Nearest Refseq: | NM_003750 |
| Nearest Ensembl: | ENSG00000107581 |
| Gene Name: | eukaryotic translation initiation factor 3 subunit A |
| Gene Alias: | EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185 |
| Gene Description: | eukaryotic translation initiation factor 3 subunit A |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
