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Difference between revisions of "TSS:Hg 111673.1"

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Line 3: Line 3:
 
|P167=
 
|P167=
 
|TIF32=
 
|TIF32=
|all_trans=ENST00000541549.2:447 uc057whi.1:447 JX312508:447 NM_003750:448 AK309542:455 BC107776:460 BC064926:464 ENST00000369144.7:466 uc001ldu.4:466 D50929:466 AK307610:470 U78311:481 BC033769:486 BC054342:489 U58046:496
+
|all_trans=ENST00000541549.2:447 JX312508:447 LP895213:448 ENST00000369144.8:453 NM_003750:453 AK309542:455 BC107776:460 BC064926:464 D50929:466 AK307610:470 U78311:481 BC033769:486 BC054342:489 U58046:496
 
|chr=chr10
 
|chr=chr10
 
|cpg_percent=0.04
 
|cpg_percent=0.04
 
|distance=447
 
|distance=447
|distance_to_tss=-449
+
|distance_to_tss=-454
 
|eIF3-p170=
 
|eIF3-p170=
 
|eIF3-theta=
 
|eIF3-theta=
Line 14: Line 14:
 
|entrez_id=8661
 
|entrez_id=8661
 
|gc_percent=0.462687
 
|gc_percent=0.462687
|gene_alias=EIF3
+
|gene_alias=EIF3{{!}}EIF3S10{{!}}P167{{!}}TIF32{{!}}eIF3-p170{{!}}eIF3-theta{{!}}p180{{!}}p185
 
|gene_description=eukaryotic translation initiation factor 3 subunit A
 
|gene_description=eukaryotic translation initiation factor 3 subunit A
 
|gene_id=8661
 
|gene_id=8661
Line 20: Line 20:
 
|gene_source=HGNC:3271
 
|gene_source=HGNC:3271
 
|gene_symbol=EIF3A
 
|gene_symbol=EIF3A
|gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta eIF3a
+
|gene_synonyms=KIAA0139 TIF32 eIF3-p170 eIF3-theta
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 
|hgnc_mgi_id=HGNC:3271
 
|hgnc_mgi_id=HGNC:3271
Line 27: Line 27:
 
|nearest_refseq=NM_003750
 
|nearest_refseq=NM_003750
 
|nearest_unigene=Hs.523299
 
|nearest_unigene=Hs.523299
|num_trans=15
+
|num_trans=14
 
|p180=
 
|p180=
 
|p185=
 
|p185=
Line 34: Line 34:
 
|start_of_center_position=119081271
 
|start_of_center_position=119081271
 
|strand=-
 
|strand=-
|transcript_name=ENST00000541549.2 uc057whi.1 JX312508
+
|transcript_name=ENST00000541549.2 JX312508
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_111673.1
 
|tss_id=hg_111673.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=J9R021 Q14152
+
|uniprot_id=J9R021
 
}}
 
}}

Revision as of 20:39, 15 June 2021

Basic information about the TSS


TSS ID:hg_111673.1
Species:human
Chr:chr10
TSS Classification:yes
Start:119081269
End:119081273
Strand:-
TSS Score:1
Start of the center position in the TSS region:119081271
End of the center position in the TSS region:119081272



Gene and protein annotation


Transcript_name:ENST00000541549.2 JX312508
Distance:447
GeneID:8661
HGNC/MGI_ID:HGNC:3271
UniProt_ID:J9R021
Gene_name:eukaryotic translation initiation factor 3 subunit A
Gene_symbol:EIF3A
Gene_synonyms:KIAA0139 TIF32 eIF3-p170 eIF3-theta
Gene_source:HGNC:3271



Transcript annotation


Transcript_name:ENST00000541549.2 JX312508
Distance:447
Num_trans:14
All_trans:ENST00000541549.2:447 JX312508:447 LP895213:448 ENST00000369144.8:453 NM_003750:453 AK309542:455 BC107776:460 BC064926:464 D50929:466 AK307610:470 U78311:481 BC033769:486 BC054342:489 U58046:496



TATA-Box annotation


Distance to TSS:-454
Nearest PromoterID:NM_003750
Entrez ID:8661
Nearest Unigene:Hs.523299
Nearest Refseq:NM_003750
Nearest Ensembl:ENSG00000107581
Gene Name:eukaryotic translation initiation factor 3 subunit A
Gene Alias:EIF3|EIF3S10|P167|TIF32|eIF3-p170|eIF3-theta|p180|p185
Gene Description:eukaryotic translation initiation factor 3 subunit A
Gene Type:protein-coding
CpG%:0.04
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):