Difference between revisions of "TSS:Hg 111707.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TIAR= | |TIAR= | ||
| − | |all_trans=ENST00000497671.5:327 | + | |all_trans=ENST00000497671.5:327 NM_001323968:327 NM_001323967:327 NM_001323965:327 NM_001323964:327 NM_001323969:327 NM_001323970:327 NM_003252:327 NR_136663:327 NR_136662:327 NR_136661:327 NM_001033925:327 BC030025:327 AK290695:374 ENST00000436547.7:392 ENST00000489822.5:392 AL833106:392 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 10: | Line 10: | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=TCBP | + | |gene_alias=TCBP{{!}}TIAR |
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
|gene_id=7073 | |gene_id=7073 | ||
| − | |gene_name=TIA1 cytotoxic granule | + | |gene_name=TIA1 cytotoxic granule associated RNA binding protein like 1 |
|gene_source=HGNC:11804 | |gene_source=HGNC:11804 | ||
|gene_symbol=TIAL1 | |gene_symbol=TIAL1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:11804 | |hgnc_mgi_id=HGNC:11804 | ||
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323967 |
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=119597355 | |start=119597355 | ||
|start_of_center_position=119597359 | |start_of_center_position=119597359 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000497671.5 NM_001033925 | + | |transcript_name=ENST00000497671.5 NM_001323968 NM_001323967 NM_001323965 NM_001323964 NM_001323969 NM_001323970 NM_003252 NR_136663 NR_136662 NR_136661 NM_001033925 BC030025 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111707.1 | |tss_id=hg_111707.1 | ||
Revision as of 20:39, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 119597359 |
|---|---|
| End of the center position in the TSS region: | 119597360 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000497671.5 NM_001323968 NM_001323967 NM_001323965 NM_001323964 NM_001323969 NM_001323970 NM_003252 NR_136663 NR_136662 NR_136661 NM_001033925 BC030025 |
|---|---|
| Distance: | 327 |
| Num_trans: | 17 |
| All_trans: | ENST00000497671.5:327 NM_001323968:327 NM_001323967:327 NM_001323965:327 NM_001323964:327 NM_001323969:327 NM_001323970:327 NM_003252:327 NR_136663:327 NR_136662:327 NR_136661:327 NM_001033925:327 BC030025:327 AK290695:374 ENST00000436547.7:392 ENST00000489822.5:392 AL833106:392 |
TATA-Box annotation
| Distance to TSS: | -330 |
|---|---|
| Nearest PromoterID: | NM_001323967 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Alias: | TCBP|TIAR |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
