Difference between revisions of "TSS:Hg 111742.1"
From referenceTSS
| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| − | |all_trans=ENST00000613048.4:193 ENST00000356226.8 | + | |all_trans=ENST00000613048.4:193 ENST00000356226.8:193 NM_022970:193 BC039243:193 ENST00000369059.5:199 ENST00000358487.10:207 NM_000141:207 NM_001144917:207 NR_073009:207 NM_001144918:207 NM_001320658:207 NM_001144919:207 ENST00000360144.7:219 AK026508:219 ENST00000604236.5:238 BC096749:241 ENST00000457416.6:248 M97193:248 M35718:253 ENST00000336553.10:255 ENST00000369060.8:353 ENST00000359354.6:353 M87771:353 ENST00000369058.7:417 AB030073:417 M80634:417 AB030075:417 AB030074:417 AB030076:417 AB030077:417 AB030078:417 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| Line 20: | Line 20: | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
|gene_id=2263 | |gene_id=2263 | ||
| Line 30: | Line 30: | ||
|hgnc_mgi_id=HGNC:3689 | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000141 |
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=31 |
|species=human | |species=human | ||
|start=121598650 | |start=121598650 | ||
|start_of_center_position=121598656 | |start_of_center_position=121598656 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000613048.4 ENST00000356226.8 | + | |transcript_name=ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111742.1 | |tss_id=hg_111742.1 | ||
Revision as of 20:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121598656 |
|---|---|
| End of the center position in the TSS region: | 121598657 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|---|---|
| Distance: | 193 |
| Num_trans: | 31 |
| All_trans: | ENST00000613048.4:193 ENST00000356226.8:193 NM_022970:193 BC039243:193 ENST00000369059.5:199 ENST00000358487.10:207 NM_000141:207 NM_001144917:207 NR_073009:207 NM_001144918:207 NM_001320658:207 NM_001144919:207 ENST00000360144.7:219 AK026508:219 ENST00000604236.5:238 BC096749:241 ENST00000457416.6:248 M97193:248 M35718:253 ENST00000336553.10:255 ENST00000369060.8:353 ENST00000359354.6:353 M87771:353 ENST00000369058.7:417 AB030073:417 M80634:417 AB030075:417 AB030074:417 AB030076:417 AB030077:417 AB030078:417 |
TATA-Box annotation
| Distance to TSS: | -199 |
|---|---|
| Nearest PromoterID: | NM_000141 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
