Difference between revisions of "TSS:Hg 111885.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001290214:0 NM_001329:0 BC002486:3 ENST00000337195.9:4 AL833398:4 ENST00000494626.6:18 BC052276:19 BC072020:42 AF016507:62 ENST00000460976.5:372 ENST00000411419.6:-457 BC047018:-457 NM_001083914:-461 LF384305:-486 MA619882:-486 ENST00000530884.1:-492 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=125160569 | |end=125160569 | ||
|end_of_center_position=125160543 | |end_of_center_position=125160543 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001329 | |nearest_refseq=NM_001329 | ||
|nearest_unigene=Hs.501345 | |nearest_unigene=Hs.501345 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=125160516 | |start=125160516 | ||
|start_of_center_position=125160542 | |start_of_center_position=125160542 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001329 | + | |transcript_name=NM_001290214 NM_001329 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111885.1 | |tss_id=hg_111885.1 | ||
Revision as of 20:43, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 125160542 |
|---|---|
| End of the center position in the TSS region: | 125160543 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001290214 NM_001329 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | NM_001290214:0 NM_001329:0 BC002486:3 ENST00000337195.9:4 AL833398:4 ENST00000494626.6:18 BC052276:19 BC072020:42 AF016507:62 ENST00000460976.5:372 ENST00000411419.6:-457 BC047018:-457 NM_001083914:-461 LF384305:-486 MA619882:-486 ENST00000530884.1:-492 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001329 |
| Entrez ID: | 1488 |
| Nearest Unigene: | Hs.501345 |
| Nearest Refseq: | NM_001329 |
| Nearest Ensembl: | ENSG00000175029 |
| Gene Name: | C-terminal binding protein 2 |
| Gene Alias: | - |
| Gene Description: | C-terminal binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
