Difference between revisions of "TSS:Hg 111887.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000530884.1:0 | + | |all_trans=ENST00000530884.1:0 LF384305:3 MA619882:3 NM_001083914:28 ENST00000411419.6:32 BC047018:32 ENST00000476817.1:-106 NM_001290214:495 NM_001329:495 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-31 |
|end=125161064 | |end=125161064 | ||
|end_of_center_position=125161061 | |end_of_center_position=125161061 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001329 | |nearest_refseq=NM_001329 | ||
|nearest_unigene=Hs.501345 | |nearest_unigene=Hs.501345 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=125161057 | |start=125161057 | ||
|start_of_center_position=125161060 | |start_of_center_position=125161060 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000530884 | + | |transcript_name=ENST00000530884.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111887.1 | |tss_id=hg_111887.1 | ||
Revision as of 20:43, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 125161060 |
|---|---|
| End of the center position in the TSS region: | 125161061 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000530884.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000530884.1:0 LF384305:3 MA619882:3 NM_001083914:28 ENST00000411419.6:32 BC047018:32 ENST00000476817.1:-106 NM_001290214:495 NM_001329:495 |
TATA-Box annotation
| Distance to TSS: | -31 |
|---|---|
| Nearest PromoterID: | NM_001083914 |
| Entrez ID: | 1488 |
| Nearest Unigene: | Hs.501345 |
| Nearest Refseq: | NM_001329 |
| Nearest Ensembl: | ENSG00000175029 |
| Gene Name: | C-terminal binding protein 2 |
| Gene Alias: | - |
| Gene Description: | C-terminal binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
