Difference between revisions of "TSS:Hg 112304.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000528694 | + | |all_trans=LF370582:100 MA606159:100 ENST00000528694.1:-232 AK097334:-232 ENST00000527763.5:-234 AK127926:-234 ENST00000530688.5:-242 AK075180:-242 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=100 |
|distance_to_tss=1283 | |distance_to_tss=1283 | ||
|end=829547 | |end=829547 | ||
| Line 12: | Line 12: | ||
|gene_description=calcium release activated channel regulator 2B | |gene_description=calcium release activated channel regulator 2B | ||
|gene_id=283229 | |gene_id=283229 | ||
| − | |gene_name= | + | |gene_name=CRACR2B |
|gene_source=HGNC:28703 | |gene_source=HGNC:28703 | ||
|gene_symbol=CRACR2B | |gene_symbol=CRACR2B | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:28703 | |hgnc_mgi_id=HGNC:28703 | ||
|nearest_ensembl=ENSG00000177685 | |nearest_ensembl=ENSG00000177685 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_173584 |
|nearest_refseq=NM_173584 | |nearest_refseq=NM_173584 | ||
|nearest_unigene=Hs.660936 | |nearest_unigene=Hs.660936 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=829538 | |start=829538 | ||
|start_of_center_position=829542 | |start_of_center_position=829542 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF370582 MA606159 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_112304.1 | |tss_id=hg_112304.1 | ||
Revision as of 20:53, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 829542 |
|---|---|
| End of the center position in the TSS region: | 829543 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | LF370582 MA606159 |
|---|---|
| Distance: | 100 |
| Num_trans: | 8 |
| All_trans: | LF370582:100 MA606159:100 ENST00000528694.1:-232 AK097334:-232 ENST00000527763.5:-234 AK127926:-234 ENST00000530688.5:-242 AK075180:-242 |
TATA-Box annotation
| Distance to TSS: | 1283 |
|---|---|
| Nearest PromoterID: | NM_173584 |
| Entrez ID: | 283229 |
| Nearest Unigene: | Hs.660936 |
| Nearest Refseq: | NM_173584 |
| Nearest Ensembl: | ENSG00000177685 |
| Gene Name: | CRACR2B |
| Gene Alias: | EFCAB4A |
| Gene Description: | calcium release activated channel regulator 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
