Difference between revisions of "TSS:Hg 112911.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000529575.5 | + | |all_trans=ENST00000529575.5:-41 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-41 | |distance=-41 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-2815 |
|end=7573958 | |end=7573958 | ||
|end_of_center_position=7573952 | |end_of_center_position=7573952 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:9250 | |hgnc_mgi_id=HGNC:9250 | ||
|nearest_ensembl=ENSG00000166387 | |nearest_ensembl=ENSG00000166387 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001351858 |
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=7573945 | |start=7573945 | ||
|start_of_center_position=7573951 | |start_of_center_position=7573951 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000529575.5 | + | |transcript_name=ENST00000529575.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112911.1 | |tss_id=hg_112911.1 | ||
Revision as of 21:07, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 7573951 |
|---|---|
| End of the center position in the TSS region: | 7573952 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000529575.5 |
|---|---|
| Distance: | -41 |
| Num_trans: | 1 |
| All_trans: | ENST00000529575.5:-41 |
TATA-Box annotation
| Distance to TSS: | -2815 |
|---|---|
| Nearest PromoterID: | NM_001351858 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
