Difference between revisions of "TSS:Hg 112921.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000529321 | + | |all_trans=NM_001256568:-18 ENST00000529321.1:20 ENST00000528883.5:-21 AK296718:-21 ENST00000530189.1:370 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-18 |
|distance_to_tss=26 | |distance_to_tss=26 | ||
|end=7597217 | |end=7597217 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_003621 | |nearest_refseq=NM_003621 | ||
|nearest_unigene=Hs.655714 | |nearest_unigene=Hs.655714 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=7597206 | |start=7597206 | ||
|start_of_center_position=7597211 | |start_of_center_position=7597211 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001256568 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_112921.1 | |tss_id=hg_112921.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8ND30 |
}} | }} | ||
Revision as of 21:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7597211 |
|---|---|
| End of the center position in the TSS region: | 7597212 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_001256568 |
|---|---|
| Distance: | -18 |
| Num_trans: | 5 |
| All_trans: | NM_001256568:-18 ENST00000529321.1:20 ENST00000528883.5:-21 AK296718:-21 ENST00000530189.1:370 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001256568 |
| Entrez ID: | 8495 |
| Nearest Unigene: | Hs.655714 |
| Nearest Refseq: | NM_003621 |
| Nearest Ensembl: | ENSG00000166387 |
| Gene Name: | PPFIA binding protein 2 |
| Gene Alias: | Cclp1 |
| Gene Description: | PPFIA binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
