Difference between revisions of "TSS:Hg 116665.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000529012 | + | |all_trans=ENST00000529012.1:41 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=41 | |distance=41 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-458 |
|end=111924204 | |end=111924204 | ||
|end_of_center_position=111924198 | |end_of_center_position=111924198 | ||
| − | |entrez_id= | + | |entrez_id=1410 |
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias= | + | |gene_alias=CMD1II{{!}}CRYA2{{!}}CTPP2{{!}}CTRCT16{{!}}HEL-S-101{{!}}HSPB5{{!}}MFM2 |
| − | |gene_description= | + | |gene_description=crystallin alpha B |
|gene_id=91894 | |gene_id=91894 | ||
|gene_name=chromosome 11 open reading frame 52 | |gene_name=chromosome 11 open reading frame 52 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30531 | |hgnc_mgi_id=HGNC:30531 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000109846 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368245 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001885 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.53454 |
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=111924191 | |start=111924191 | ||
|start_of_center_position=111924197 | |start_of_center_position=111924197 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000529012 | + | |transcript_name=ENST00000529012.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_116665.1 | |tss_id=hg_116665.1 | ||
Revision as of 22:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111924197 |
|---|---|
| End of the center position in the TSS region: | 111924198 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000529012.1 |
|---|---|
| Distance: | 41 |
| Num_trans: | 1 |
| All_trans: | ENST00000529012.1:41 |
TATA-Box annotation
| Distance to TSS: | -458 |
|---|---|
| Nearest PromoterID: | NM_001368245 |
| Entrez ID: | 1410 |
| Nearest Unigene: | Hs.53454 |
| Nearest Refseq: | NM_001885 |
| Nearest Ensembl: | ENSG00000109846 |
| Gene Name: | chromosome 11 open reading frame 52 |
| Gene Alias: | CMD1II|CRYA2|CTPP2|CTRCT16|HEL-S-101|HSPB5|MFM2 |
| Gene Description: | crystallin alpha B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
