Difference between revisions of "TSS:Hg 117952.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000525923 | + | |all_trans=ENST00000525923.1:-260 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-260 | |distance=-260 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3780 |
|end=1032949 | |end=1032949 | ||
|end_of_center_position=1032938 | |end_of_center_position=1032938 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=MUC-6 | |gene_alias=MUC-6 | ||
| − | |gene_description= | + | |gene_description=mucin 6, oligomeric mucus/gel-forming |
|gene_id=4588 | |gene_id=4588 | ||
| − | |gene_name= | + | |gene_name=mucin 6, oligomeric mucus/gel-forming |
|gene_source=HGNC:7517 | |gene_source=HGNC:7517 | ||
|gene_symbol=MUC6 | |gene_symbol=MUC6 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005961 | |nearest_refseq=NM_005961 | ||
|nearest_unigene=Hs.528432 | |nearest_unigene=Hs.528432 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=1032926 | |start=1032926 | ||
|start_of_center_position=1032937 | |start_of_center_position=1032937 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000525923 | + | |transcript_name=ENST00000525923.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_117952.1 | |tss_id=hg_117952.1 | ||
Revision as of 23:04, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 1032937 |
|---|---|
| End of the center position in the TSS region: | 1032938 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000525923.1 |
|---|---|
| Distance: | -260 |
| Num_trans: | 1 |
| All_trans: | ENST00000525923.1:-260 |
TATA-Box annotation
| Distance to TSS: | 3780 |
|---|---|
| Nearest PromoterID: | NM_005961 |
| Entrez ID: | 4588 |
| Nearest Unigene: | Hs.528432 |
| Nearest Refseq: | NM_005961 |
| Nearest Ensembl: | ENSG00000184956 |
| Gene Name: | mucin 6, oligomeric mucus/gel-forming |
| Gene Alias: | MUC-6 |
| Gene Description: | mucin 6, oligomeric mucus/gel-forming |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
