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Difference between revisions of "TSS:Hg 117956.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000421673.6:165 NM_005961:165 uc001lsw.3:165 AY312160:165 AY458429:216
+
|all_trans=ENST00000421673.7:153 NM_005961:153 AY312160:165 AY458429:216
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.07
 
|cpg_percent=0.07
|distance=165
+
|distance=153
|distance_to_tss=-168
+
|distance_to_tss=-156
 
|end=1036877
 
|end=1036877
 
|end_of_center_position=1036874
 
|end_of_center_position=1036874
Line 10: Line 10:
 
|gc_percent=0.656716
 
|gc_percent=0.656716
 
|gene_alias=MUC-6
 
|gene_alias=MUC-6
|gene_description="mucin 6, oligomeric mucus/gel-forming"
+
|gene_description=mucin 6, oligomeric mucus/gel-forming
 
|gene_id=4588
 
|gene_id=4588
|gene_name="mucin 6, oligomeric mucus/gel-forming"
+
|gene_name=mucin 6, oligomeric mucus/gel-forming
 
|gene_source=HGNC:7517
 
|gene_source=HGNC:7517
 
|gene_symbol=MUC6
 
|gene_symbol=MUC6
Line 22: Line 22:
 
|nearest_refseq=NM_005961
 
|nearest_refseq=NM_005961
 
|nearest_unigene=Hs.528432
 
|nearest_unigene=Hs.528432
|num_trans=5
+
|num_trans=4
 
|species=human
 
|species=human
 
|start=1036870
 
|start=1036870
 
|start_of_center_position=1036873
 
|start_of_center_position=1036873
 
|strand=-
 
|strand=-
|transcript_name=ENST00000421673.6 NM_005961 uc001lsw.3 AY312160
+
|transcript_name=ENST00000421673.7 NM_005961
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_117956.1
 
|tss_id=hg_117956.1

Revision as of 23:04, 15 June 2021

Basic information about the TSS


TSS ID:hg_117956.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1036870
End:1036877
Strand:-
TSS Score:1
Start of the center position in the TSS region:1036873
End of the center position in the TSS region:1036874



Gene and protein annotation


Transcript_name:ENST00000421673.7 NM_005961
Distance:153
GeneID:4588
HGNC/MGI_ID:HGNC:7517
UniProt_ID:Q6W4X9
Gene_name:mucin 6, oligomeric mucus/gel-forming
Gene_symbol:MUC6
Gene_synonyms:
Gene_source:HGNC:7517



Transcript annotation


Transcript_name:ENST00000421673.7 NM_005961
Distance:153
Num_trans:4
All_trans:ENST00000421673.7:153 NM_005961:153 AY312160:165 AY458429:216



TATA-Box annotation


Distance to TSS:-156
Nearest PromoterID:NM_005961
Entrez ID:4588
Nearest Unigene:Hs.528432
Nearest Refseq:NM_005961
Nearest Ensembl:ENSG00000184956
Gene Name:mucin 6, oligomeric mucus/gel-forming
Gene Alias:MUC-6
Gene Description:mucin 6, oligomeric mucus/gel-forming
Gene Type:protein-coding
CpG%:0.07
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):