Difference between revisions of "TSS:Hg 118088.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC106078:-6 ENST00000442037.5:-209 | + | |all_trans=BC106078:-6 LF370702:175 MA606279:175 ENST00000442037.5:-209 ENST00000431095.7:-298 BC010185:376 LF370700:423 MA606277:423 BC106079:435 LF370706:-436 MA606283:-436 ENST00000447298.2:-485 LF370699:500 MA606276:500 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=H19 imprinted maternally expressed transcript |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| − | |gene_synonyms=ASM ASM1 D11S813E LINC00008 NCRNA00008 | + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=1995948 | |start=1995948 | ||
Revision as of 23:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1995965 |
|---|---|
| End of the center position in the TSS region: | 1995966 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC106078 |
|---|---|
| Distance: | -6 |
| Num_trans: | 14 |
| All_trans: | BC106078:-6 LF370702:175 MA606279:175 ENST00000442037.5:-209 ENST00000431095.7:-298 BC010185:376 LF370700:423 MA606277:423 BC106079:435 LF370706:-436 MA606283:-436 ENST00000447298.2:-485 LF370699:500 MA606276:500 |
TATA-Box annotation
| Distance to TSS: | 866 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | H19 imprinted maternally expressed transcript |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
