Difference between revisions of "TSS:Hg 118097.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000442037.5:47 | + | |all_trans=ENST00000431095.7:-32 ENST00000442037.5:47 LF370706:-170 MA606283:-170 ENST00000447298.2:-219 BC106078:250 ENST00000436715.5:-323 LF370707:-344 MA606284:-344 BC009853:-345 AK123560:-353 LC106311:-400 BC013067:-457 LF370702:464 MA606279:464 ENST00000417089.6:-492 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=-32 |
|distance_to_tss=588 | |distance_to_tss=588 | ||
|end=1996248 | |end=1996248 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=H19 imprinted maternally expressed transcript |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| − | |gene_synonyms=ASM ASM1 D11S813E LINC00008 NCRNA00008 | + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=1996237 | |start=1996237 | ||
|start_of_center_position=1996242 | |start_of_center_position=1996242 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000431095.7 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118097.1 | |tss_id=hg_118097.1 | ||
Revision as of 23:07, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 1996242 |
|---|---|
| End of the center position in the TSS region: | 1996243 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000431095.7 |
|---|---|
| Distance: | -32 |
| Num_trans: | 16 |
| All_trans: | ENST00000431095.7:-32 ENST00000442037.5:47 LF370706:-170 MA606283:-170 ENST00000447298.2:-219 BC106078:250 ENST00000436715.5:-323 LF370707:-344 MA606284:-344 BC009853:-345 AK123560:-353 LC106311:-400 BC013067:-457 LF370702:464 MA606279:464 ENST00000417089.6:-492 |
TATA-Box annotation
| Distance to TSS: | 588 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | H19 imprinted maternally expressed transcript |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
