Difference between revisions of "TSS:Hg 118099.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000447298. | + | |all_trans=LF370706:9 MA606283:9 ENST00000447298.2:-32 ENST00000436715.5:-136 ENST00000431095.7:147 LF370707:-157 MA606284:-157 BC009853:-158 AK123560:-166 LC106311:-213 ENST00000442037.5:236 BC013067:-270 ENST00000417089.6:-305 LF370708:-340 MA606285:-340 MB407720:-352 AB372813:-352 LF160018:-352 LP726824:-352 LP819094:-352 LP939036:-352 LQ072819:-352 LQ441148:-352 LX280753:-352 LY405562:-352 LZ234371:-352 MA260801:-352 MA646320:-352 MA734204:-352 MS833933:-352 MS834818:-352 MA803373:-352 MB406830:-352 LF160208:-387 LP727120:-387 LP819390:-387 LP939332:-387 LQ072820:-387 LQ441143:-387 LQ673013:-387 LY405561:-387 LY496320:-387 LY496766:-387 LY497013:-387 LY497420:-387 LY497638:-387 LY498022:-387 LZ234253:-387 LZ238499:-387 LZ239038:-387 MA260800:-387 MA405867:-387 MA646321:-387 MA734205:-387 MS833934:-387 MS884200:-387 MS884607:-387 MS902101:-387 MS994328:-387 MS994774:-387 MS996704:-387 MS997088:-387 MA803374:-387 MA805853:-387 MA806405:-387 MA822458:-387 LY616263:-387 LY616802:-387 LG052084:-396 LY496531:-396 LY497206:-396 LY497818:-396 LZ238758:-396 MS884393:-396 MS994539:-396 MS996884:-396 MA806128:-396 MA822797:-396 LY616522:-396 MB407223:-396 BC106078:439 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=9 |
|distance_to_tss=400 | |distance_to_tss=400 | ||
|end=1996435 | |end=1996435 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=MIR675 |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=81 |
|species=human | |species=human | ||
|start=1996426 | |start=1996426 | ||
|start_of_center_position=1996430 | |start_of_center_position=1996430 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF370706 MA606283 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118099.1 | |tss_id=hg_118099.1 | ||
Latest revision as of 23:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1996430 |
|---|---|
| End of the center position in the TSS region: | 1996431 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF370706 MA606283 |
|---|---|
| Distance: | 9 |
| Num_trans: | 81 |
| All_trans: | LF370706:9 MA606283:9 ENST00000447298.2:-32 ENST00000436715.5:-136 ENST00000431095.7:147 LF370707:-157 MA606284:-157 BC009853:-158 AK123560:-166 LC106311:-213 ENST00000442037.5:236 BC013067:-270 ENST00000417089.6:-305 LF370708:-340 MA606285:-340 MB407720:-352 AB372813:-352 LF160018:-352 LP726824:-352 LP819094:-352 LP939036:-352 LQ072819:-352 LQ441148:-352 LX280753:-352 LY405562:-352 LZ234371:-352 MA260801:-352 MA646320:-352 MA734204:-352 MS833933:-352 MS834818:-352 MA803373:-352 MB406830:-352 LF160208:-387 LP727120:-387 LP819390:-387 LP939332:-387 LQ072820:-387 LQ441143:-387 LQ673013:-387 LY405561:-387 LY496320:-387 LY496766:-387 LY497013:-387 LY497420:-387 LY497638:-387 LY498022:-387 LZ234253:-387 LZ238499:-387 LZ239038:-387 MA260800:-387 MA405867:-387 MA646321:-387 MA734205:-387 MS833934:-387 MS884200:-387 MS884607:-387 MS902101:-387 MS994328:-387 MS994774:-387 MS996704:-387 MS997088:-387 MA803374:-387 MA805853:-387 MA806405:-387 MA822458:-387 LY616263:-387 LY616802:-387 LG052084:-396 LY496531:-396 LY497206:-396 LY497818:-396 LZ238758:-396 MS884393:-396 MS994539:-396 MS996884:-396 MA806128:-396 MA822797:-396 LY616522:-396 MB407223:-396 BC106078:439 |
TATA-Box annotation
| Distance to TSS: | 400 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | MIR675 |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.05 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
