Difference between revisions of "TSS:Hg 118101.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC013067:-21 AK123560:77 BC009853:85 AB372813:-103 ENST00000436715.5:107 | + | |all_trans=BC013067:-21 LC106311:30 ENST00000417089.6:-56 AK123560:77 BC009853:85 LF370707:86 MA606284:86 LF370708:-91 MA606285:-91 MB407720:-103 AB372813:-103 LF160018:-103 LP726824:-103 LP819094:-103 LP939036:-103 LQ072819:-103 LQ441148:-103 LX280753:-103 LY405562:-103 LZ234371:-103 MA260801:-103 MA646320:-103 MA734204:-103 MS833933:-103 MS834818:-103 MA803373:-103 MB406830:-103 ENST00000436715.5:107 LF160208:-138 LP727120:-138 LP819390:-138 LP939332:-138 LQ072820:-138 LQ441143:-138 LQ673013:-138 LY405561:-138 LY496320:-138 LY496766:-138 LY497013:-138 LY497420:-138 LY497638:-138 LY498022:-138 LZ234253:-138 LZ238499:-138 LZ239038:-138 MA260800:-138 MA405867:-138 MA646321:-138 MA734205:-138 MS833934:-138 MS884200:-138 MS884607:-138 MS902101:-138 MS994328:-138 MS994774:-138 MS996704:-138 MS997088:-138 MA803374:-138 MA805853:-138 MA806405:-138 MA822458:-138 LY616263:-138 LY616802:-138 LG052084:-147 LY496531:-147 LY497206:-147 LY497818:-147 LZ238758:-147 MS884393:-147 MS994539:-147 MS996884:-147 MA806128:-147 MA822797:-147 LY616522:-147 MB407223:-147 ENST00000447298.2:211 LF370706:260 MA606283:260 LF370709:-349 MA606286:-349 ENST00000431095.7:398 BC006831:-421 BC007513:-461 LF370711:-465 MA606288:-465 BC053637:-475 ENST00000442037.5:487 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
| − | |gene_name= | + | |gene_name=H19 imprinted maternally expressed transcript |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
| − | |gene_synonyms=ASM ASM1 D11S813E LINC00008 NCRNA00008 | + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=87 |
|species=human | |species=human | ||
|start=1996677 | |start=1996677 | ||
Revision as of 23:07, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1996680 |
|---|---|
| End of the center position in the TSS region: | 1996681 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC013067 |
|---|---|
| Distance: | -21 |
| Num_trans: | 87 |
| All_trans: | BC013067:-21 LC106311:30 ENST00000417089.6:-56 AK123560:77 BC009853:85 LF370707:86 MA606284:86 LF370708:-91 MA606285:-91 MB407720:-103 AB372813:-103 LF160018:-103 LP726824:-103 LP819094:-103 LP939036:-103 LQ072819:-103 LQ441148:-103 LX280753:-103 LY405562:-103 LZ234371:-103 MA260801:-103 MA646320:-103 MA734204:-103 MS833933:-103 MS834818:-103 MA803373:-103 MB406830:-103 ENST00000436715.5:107 LF160208:-138 LP727120:-138 LP819390:-138 LP939332:-138 LQ072820:-138 LQ441143:-138 LQ673013:-138 LY405561:-138 LY496320:-138 LY496766:-138 LY497013:-138 LY497420:-138 LY497638:-138 LY498022:-138 LZ234253:-138 LZ238499:-138 LZ239038:-138 MA260800:-138 MA405867:-138 MA646321:-138 MA734205:-138 MS833934:-138 MS884200:-138 MS884607:-138 MS902101:-138 MS994328:-138 MS994774:-138 MS996704:-138 MS997088:-138 MA803374:-138 MA805853:-138 MA806405:-138 MA822458:-138 LY616263:-138 LY616802:-138 LG052084:-147 LY496531:-147 LY497206:-147 LY497818:-147 LZ238758:-147 MS884393:-147 MS994539:-147 MS996884:-147 MA806128:-147 MA822797:-147 LY616522:-147 MB407223:-147 ENST00000447298.2:211 LF370706:260 MA606283:260 LF370709:-349 MA606286:-349 ENST00000431095.7:398 BC006831:-421 BC007513:-461 LF370711:-465 MA606288:-465 BC053637:-475 ENST00000442037.5:487 |
TATA-Box annotation
| Distance to TSS: | 150 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000284010 |
| Gene Name: | H19 imprinted maternally expressed transcript |
| Gene Alias: | MIRN675|hsa-mir-675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
