Difference between revisions of "TSS:Hg 118107.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=BC007513:-4 BC053637:-18 BC006831:25 BC023213:-46 ENST00000411861.5 | + | |all_trans=BC007513:-4 LF370711:-8 MA606288:-8 BC053637:-18 BC006831:25 BC023213:-46 ENST00000411861.5:-76 BC063626:-76 BC098439:-94 BC063564:-96 LF370709:97 MA606286:97 LF370712:-105 MA606289:-105 BC069247:-122 LF370714:-174 MA606291:-174 BC015952:-216 LG052084:299 LY496531:299 LY497206:299 LY497818:299 LZ238758:299 MS884393:299 MS994539:299 MS996884:299 MA806128:299 MA822797:299 LY616522:299 MB407223:299 LF160208:308 LP727120:308 LP819390:308 LP939332:308 LQ072820:308 LQ441143:308 LQ673013:308 LY405561:308 LY496320:308 LY496766:308 LY497013:308 LY497420:308 LY497638:308 LY498022:308 LZ234253:308 LZ238499:308 LZ239038:308 MA260800:308 MA405867:308 MA646321:308 MA734205:308 MS833934:308 MS884200:308 MS884607:308 MS902101:308 MS994328:308 MS994774:308 MS996704:308 MS997088:308 MA803374:308 MA805853:308 MA806405:308 MA822458:308 LY616263:308 LY616802:308 ENST00000439725.5:-319 LF370715:-328 MA606292:-328 BC053636:-333 BC110657:-333 MB407720:343 AB372813:343 LF160018:343 LP726824:343 LP819094:343 LP939036:343 LQ072819:343 LQ441148:343 LX280753:343 LY405562:343 LZ234371:343 MA260801:343 MA646320:343 MA734204:343 MS833933:343 MS834818:343 MA803373:343 MB406830:343 LF370708:355 MA606285:355 BC115700:-362 ENST00000417089.6:390 BC013067:425 LF370717:-448 MA606294:-448 LC106311:482 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
Line 9: | Line 9: | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
− | |gene_alias=MIRN675 | + | |gene_alias=MIRN675{{!}}hsa-mir-675 |
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
|gene_id=283120 | |gene_id=283120 | ||
− | |gene_name= | + | |gene_name=H19 imprinted maternally expressed transcript |
|gene_source=HGNC:4713 | |gene_source=HGNC:4713 | ||
|gene_symbol=H19 | |gene_symbol=H19 | ||
− | |gene_synonyms=ASM ASM1 D11S813E LINC00008 NCRNA00008 | + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 MIR675HG NCRNA00008 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:4713 | |hgnc_mgi_id=HGNC:4713 | ||
|hsa-mir-675= | |hsa-mir-675= | ||
− | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284010 |
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
− | |num_trans= | + | |num_trans=96 |
|species=human | |species=human | ||
|start=1997129 | |start=1997129 |
Revision as of 23:07, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 1997135 |
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End of the center position in the TSS region: | 1997136 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | BC007513 |
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Distance: | -4 |
Num_trans: | 96 |
All_trans: | BC007513:-4 LF370711:-8 MA606288:-8 BC053637:-18 BC006831:25 BC023213:-46 ENST00000411861.5:-76 BC063626:-76 BC098439:-94 BC063564:-96 LF370709:97 MA606286:97 LF370712:-105 MA606289:-105 BC069247:-122 LF370714:-174 MA606291:-174 BC015952:-216 LG052084:299 LY496531:299 LY497206:299 LY497818:299 LZ238758:299 MS884393:299 MS994539:299 MS996884:299 MA806128:299 MA822797:299 LY616522:299 MB407223:299 LF160208:308 LP727120:308 LP819390:308 LP939332:308 LQ072820:308 LQ441143:308 LQ673013:308 LY405561:308 LY496320:308 LY496766:308 LY497013:308 LY497420:308 LY497638:308 LY498022:308 LZ234253:308 LZ238499:308 LZ239038:308 MA260800:308 MA405867:308 MA646321:308 MA734205:308 MS833934:308 MS884200:308 MS884607:308 MS902101:308 MS994328:308 MS994774:308 MS996704:308 MS997088:308 MA803374:308 MA805853:308 MA806405:308 MA822458:308 LY616263:308 LY616802:308 ENST00000439725.5:-319 LF370715:-328 MA606292:-328 BC053636:-333 BC110657:-333 MB407720:343 AB372813:343 LF160018:343 LP726824:343 LP819094:343 LP939036:343 LQ072819:343 LQ441148:343 LX280753:343 LY405562:343 LZ234371:343 MA260801:343 MA646320:343 MA734204:343 MS833933:343 MS834818:343 MA803373:343 MB406830:343 LF370708:355 MA606285:355 BC115700:-362 ENST00000417089.6:390 BC013067:425 LF370717:-448 MA606294:-448 LC106311:482 |
TATA-Box annotation
Distance to TSS: | -304 |
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Nearest PromoterID: | NR_030533 |
Entrez ID: | 100033819 |
Nearest Unigene: | |
Nearest Refseq: | NR_030533 |
Nearest Ensembl: | ENSG00000284010 |
Gene Name: | H19 imprinted maternally expressed transcript |
Gene Alias: | MIRN675|hsa-mir-675 |
Gene Description: | microRNA 675 |
Gene Type: | ncRNA |
CpG%: | 0.025 |
GC%: | 0.651741 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |