Difference between revisions of "TSS:Hg 118266.1"
From referenceTSS
Line 2: | Line 2: | ||
|NAP2= | |NAP2= | ||
|NAP2L= | |NAP2L= | ||
− | |all_trans=ENST00000620138.4 | + | |all_trans=ENST00000620138.4:-10 ENST00000526115.5:-10 U77456:-10 AK312599:-17 ENST00000380542.9:32 NM_005969:32 NM_001369377:32 NM_001369376:32 NM_001369375:32 NM_001369383:32 NM_001369380:32 NM_001369381:32 NM_001369382:32 AK316324:40 ENST00000532325.6:61 ENST00000399614.6:61 AK299515:61 AK316548:70 AK316242:70 ENST00000448187.5:73 BC022090:74 ENST00000526842.5:99 ENST00000531291.5:102 ENST00000529361.5:103 ENST00000528968.5:103 ENST00000534372.1:103 NM_001369378:254 NM_001369384:254 ENST00000430811.5:259 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=-10 | |distance=-10 | ||
− | |distance_to_tss= | + | |distance_to_tss=-35 |
|end=2992367 | |end=2992367 | ||
|end_of_center_position=2992364 | |end_of_center_position=2992364 | ||
|entrez_id=4676 | |entrez_id=4676 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
− | |gene_alias=NAP1L4b | + | |gene_alias=NAP1L4b{{!}}NAP2{{!}}NAP2L{{!}}hNAP2 |
|gene_description=nucleosome assembly protein 1 like 4 | |gene_description=nucleosome assembly protein 1 like 4 | ||
|gene_id=4676 | |gene_id=4676 | ||
Line 25: | Line 25: | ||
|nearest_refseq=NM_005969 | |nearest_refseq=NM_005969 | ||
|nearest_unigene=Hs.731784 | |nearest_unigene=Hs.731784 | ||
− | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=2992360 | |start=2992360 | ||
|start_of_center_position=2992363 | |start_of_center_position=2992363 | ||
|strand=- | |strand=- | ||
− | |transcript_name=ENST00000620138.4 | + | |transcript_name=ENST00000620138.4 ENST00000526115.5 U77456 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_118266.1 | |tss_id=hg_118266.1 | ||
|tss_score=1 | |tss_score=1 | ||
− | |uniprot_id= | + | |uniprot_id=Q99733 |
}} | }} |
Revision as of 23:11, 15 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 2992363 |
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End of the center position in the TSS region: | 2992364 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000620138.4 ENST00000526115.5 U77456 |
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Distance: | -10 |
Num_trans: | 29 |
All_trans: | ENST00000620138.4:-10 ENST00000526115.5:-10 U77456:-10 AK312599:-17 ENST00000380542.9:32 NM_005969:32 NM_001369377:32 NM_001369376:32 NM_001369375:32 NM_001369383:32 NM_001369380:32 NM_001369381:32 NM_001369382:32 AK316324:40 ENST00000532325.6:61 ENST00000399614.6:61 AK299515:61 AK316548:70 AK316242:70 ENST00000448187.5:73 BC022090:74 ENST00000526842.5:99 ENST00000531291.5:102 ENST00000529361.5:103 ENST00000528968.5:103 ENST00000534372.1:103 NM_001369378:254 NM_001369384:254 ENST00000430811.5:259 |
TATA-Box annotation
Distance to TSS: | -35 |
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Nearest PromoterID: | NM_005969 |
Entrez ID: | 4676 |
Nearest Unigene: | Hs.731784 |
Nearest Refseq: | NM_005969 |
Nearest Ensembl: | ENSG00000205531 |
Gene Name: | nucleosome assembly protein 1 like 4 |
Gene Alias: | NAP1L4b|NAP2|NAP2L|hNAP2 |
Gene Description: | nucleosome assembly protein 1 like 4 |
Gene Type: | protein-coding |
CpG%: | 0.125 |
GC%: | 0.671642 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |