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Difference between revisions of "TSS:Hg 118266.1"

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Line 2: Line 2:
 
|NAP2=
 
|NAP2=
 
|NAP2L=
 
|NAP2L=
|all_trans=ENST00000620138.4:-10 ENST00000380542.8:-10 ENST00000526115.5:-10 NM_005969:-10 uc010qxn.3:-10 uc001lxc.4:-10 uc010qxm.3:-10 U77456:-10 AK312599:-17 AK316324:40 ENST00000532325.6:61 ENST00000399614.6:61 uc057xzq.1:61 uc057xzs.1:61 AK299515:61 AK316548:70 AK316242:70 ENST00000448187.5:73 uc057xzr.1:73 BC022090:74 ENST00000526842.5:99 uc057xzx.1:99 ENST00000531291.5:102 uc057xzy.1:102 ENST00000529361.5:103 ENST00000528968.5:103 ENST00000534372.1:103 uc057xzu.1:103 uc057xzv.1:103 uc057yaa.1:103 ENST00000430811.5:259 uc057xzt.1:259
+
|all_trans=ENST00000620138.4:-10 ENST00000526115.5:-10 U77456:-10 AK312599:-17 ENST00000380542.9:32 NM_005969:32 NM_001369377:32 NM_001369376:32 NM_001369375:32 NM_001369383:32 NM_001369380:32 NM_001369381:32 NM_001369382:32 AK316324:40 ENST00000532325.6:61 ENST00000399614.6:61 AK299515:61 AK316548:70 AK316242:70 ENST00000448187.5:73 BC022090:74 ENST00000526842.5:99 ENST00000531291.5:102 ENST00000529361.5:103 ENST00000528968.5:103 ENST00000534372.1:103 NM_001369378:254 NM_001369384:254 ENST00000430811.5:259
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0.125
 
|cpg_percent=0.125
 
|distance=-10
 
|distance=-10
|distance_to_tss=13
+
|distance_to_tss=-35
 
|end=2992367
 
|end=2992367
 
|end_of_center_position=2992364
 
|end_of_center_position=2992364
 
|entrez_id=4676
 
|entrez_id=4676
 
|gc_percent=0.671642
 
|gc_percent=0.671642
|gene_alias=NAP1L4b
+
|gene_alias=NAP1L4b{{!}}NAP2{{!}}NAP2L{{!}}hNAP2
 
|gene_description=nucleosome assembly protein 1 like 4
 
|gene_description=nucleosome assembly protein 1 like 4
 
|gene_id=4676
 
|gene_id=4676
Line 25: Line 25:
 
|nearest_refseq=NM_005969
 
|nearest_refseq=NM_005969
 
|nearest_unigene=Hs.731784
 
|nearest_unigene=Hs.731784
|num_trans=32
+
|num_trans=29
 
|species=human
 
|species=human
 
|start=2992360
 
|start=2992360
 
|start_of_center_position=2992363
 
|start_of_center_position=2992363
 
|strand=-
 
|strand=-
|transcript_name=ENST00000620138.4 ENST00000380542.8 ENST00000526115.5 NM_005969 uc010qxn.3 uc001lxc.4 uc010qxm.3 U77456
+
|transcript_name=ENST00000620138.4 ENST00000526115.5 U77456
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_118266.1
 
|tss_id=hg_118266.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=A0A024RCC9 Q99733
+
|uniprot_id=Q99733
 
}}
 
}}

Revision as of 23:11, 15 June 2021

Basic information about the TSS


TSS ID:hg_118266.1
Species:human
Chr:chr11
TSS Classification:yes
Start:2992360
End:2992367
Strand:-
TSS Score:1
Start of the center position in the TSS region:2992363
End of the center position in the TSS region:2992364



Gene and protein annotation


Transcript_name:ENST00000620138.4 ENST00000526115.5 U77456
Distance:-10
GeneID:4676
HGNC/MGI_ID:HGNC:7640
UniProt_ID:Q99733
Gene_name:nucleosome assembly protein 1 like 4
Gene_symbol:NAP1L4
Gene_synonyms:NAP2
Gene_source:HGNC:7640



Transcript annotation


Transcript_name:ENST00000620138.4 ENST00000526115.5 U77456
Distance:-10
Num_trans:29
All_trans:ENST00000620138.4:-10 ENST00000526115.5:-10 U77456:-10 AK312599:-17 ENST00000380542.9:32 NM_005969:32 NM_001369377:32 NM_001369376:32 NM_001369375:32 NM_001369383:32 NM_001369380:32 NM_001369381:32 NM_001369382:32 AK316324:40 ENST00000532325.6:61 ENST00000399614.6:61 AK299515:61 AK316548:70 AK316242:70 ENST00000448187.5:73 BC022090:74 ENST00000526842.5:99 ENST00000531291.5:102 ENST00000529361.5:103 ENST00000528968.5:103 ENST00000534372.1:103 NM_001369378:254 NM_001369384:254 ENST00000430811.5:259



TATA-Box annotation


Distance to TSS:-35
Nearest PromoterID:NM_005969
Entrez ID:4676
Nearest Unigene:Hs.731784
Nearest Refseq:NM_005969
Nearest Ensembl:ENSG00000205531
Gene Name:nucleosome assembly protein 1 like 4
Gene Alias:NAP1L4b|NAP2|NAP2L|hNAP2
Gene Description:nucleosome assembly protein 1 like 4
Gene Type:protein-coding
CpG%:0.125
GC%:0.671642
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):