Difference between revisions of "TSS:Hg 119554.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000530405.5 | + | |all_trans=ENST00000530405.5:-249 DQ893156:330 DQ896450:330 AB528520:332 KJ893695:333 CU680096:333 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_016223 | |nearest_refseq=NM_016223 | ||
|nearest_unigene=Hs.334639 | |nearest_unigene=Hs.334639 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=47183060 | |start=47183060 | ||
|start_of_center_position=47183066 | |start_of_center_position=47183066 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000530405.5 | + | |transcript_name=ENST00000530405.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_119554.1 | |tss_id=hg_119554.1 | ||
Revision as of 23:41, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 47183066 |
|---|---|
| End of the center position in the TSS region: | 47183067 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000530405.5 |
|---|---|
| Distance: | -249 |
| Num_trans: | 6 |
| All_trans: | ENST00000530405.5:-249 DQ893156:330 DQ896450:330 AB528520:332 KJ893695:333 CU680096:333 |
TATA-Box annotation
| Distance to TSS: | 2815 |
|---|---|
| Nearest PromoterID: | NM_001184975 |
| Entrez ID: | 29763 |
| Nearest Unigene: | Hs.334639 |
| Nearest Refseq: | NM_016223 |
| Nearest Ensembl: | ENSG00000165912 |
| Gene Name: | protein kinase C and casein kinase substrate in neurons 3 |
| Gene Alias: | SDPIII |
| Gene Description: | protein kinase C and casein kinase substrate in neurons 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
