Difference between revisions of "TSS:Hg 121145.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NUMA= | |NUMA= | ||
| − | |all_trans=ENST00000535111.5 | + | |all_trans=ENST00000535111.5:0 ENST00000541719.5:2 ENST00000537217.5:-6 BC103765:-6 ENST00000366394.7:-10 ENST00000540843.5:-26 AB210007:-26 BC027493:-26 BC043499:-26 Z11583:-43 AK307577:-43 ENST00000351960.10:44 BC004165:44 ENST00000358965.10:-47 Z11584:-47 ENST00000546131.1:-68 ENST00000393695.8:-74 ENST00000543937.5:-74 ENST00000368959.9:-74 ENST00000537905.5:-74 NM_006185:-74 NR_104476:-74 ENST00000541641.5:-86 AB621824:-86 BC068539:-224 ENST00000613205.4:-225 ENST00000543450.1:-225 NM_001286561:-225 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=92 |
|end=72080468 | |end=72080468 | ||
|end_of_center_position=72080451 | |end_of_center_position=72080451 | ||
|entrez_id=4926 | |entrez_id=4926 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=NMP-22 | + | |gene_alias=NMP-22{{!}}NUMA |
|gene_description=nuclear mitotic apparatus protein 1 | |gene_description=nuclear mitotic apparatus protein 1 | ||
|gene_id=4926 | |gene_id=4926 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006185 | |nearest_refseq=NM_006185 | ||
|nearest_unigene=Hs.325978 | |nearest_unigene=Hs.325978 | ||
| − | |num_trans= | + | |num_trans=28 |
|species=human | |species=human | ||
|start=72080432 | |start=72080432 | ||
|start_of_center_position=72080450 | |start_of_center_position=72080450 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=48(AGGCCTAAAAGG,-,0.00) |
| − | |transcript_name=ENST00000535111.5 | + | |transcript_name=ENST00000535111.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_121145.1 | |tss_id=hg_121145.1 | ||
Revision as of 00:18, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72080450 |
|---|---|
| End of the center position in the TSS region: | 72080451 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000535111.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000535111.5:0 ENST00000541719.5:2 ENST00000537217.5:-6 BC103765:-6 ENST00000366394.7:-10 ENST00000540843.5:-26 AB210007:-26 BC027493:-26 BC043499:-26 Z11583:-43 AK307577:-43 ENST00000351960.10:44 BC004165:44 ENST00000358965.10:-47 Z11584:-47 ENST00000546131.1:-68 ENST00000393695.8:-74 ENST00000543937.5:-74 ENST00000368959.9:-74 ENST00000537905.5:-74 NM_006185:-74 NR_104476:-74 ENST00000541641.5:-86 AB621824:-86 BC068539:-224 ENST00000613205.4:-225 ENST00000543450.1:-225 NM_001286561:-225 |
TATA-Box annotation
| Distance to TSS: | 92 |
|---|---|
| Nearest PromoterID: | NR_104476 |
| Entrez ID: | 4926 |
| Nearest Unigene: | Hs.325978 |
| Nearest Refseq: | NM_006185 |
| Nearest Ensembl: | ENSG00000137497 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | NMP-22|NUMA |
| Gene Description: | nuclear mitotic apparatus protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 48(AGGCCTAAAAGG,-,0.00) |
