Difference between revisions of "TSS:Hg 121802.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KOX-1= | |KOX-1= | ||
|RENOX= | |RENOX= | ||
| − | |all_trans=ENST00000393282.2 | + | |all_trans=ENST00000393282.2:94 BC051371:94 LP764880:174 LP764881:174 AB041035:174 ENST00000525278.1:265 ENST00000263317.9:284 NM_001291926:284 NM_016931:284 NM_001143836:284 NR_120406:284 ENST00000525196.5:299 BC034780:299 ENST00000529343.5:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 11: | Line 11: | ||
|entrez_id=50507 | |entrez_id=50507 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=KOX | + | |gene_alias=KOX{{!}}KOX-1{{!}}RENOX |
|gene_description=NADPH oxidase 4 | |gene_description=NADPH oxidase 4 | ||
|gene_id=50507 | |gene_id=50507 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:7891 | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000086991 | |nearest_ensembl=ENSG00000086991 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_120406 |
|nearest_refseq=NM_016931 | |nearest_refseq=NM_016931 | ||
|nearest_unigene=Hs.371036 | |nearest_unigene=Hs.371036 | ||
| − | |num_trans= | + | |num_trans=33 |
|species=human | |species=human | ||
|start=89491658 | |start=89491658 | ||
|start_of_center_position=89491664 | |start_of_center_position=89491664 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000393282.2 | + | |transcript_name=ENST00000393282.2 BC051371 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_121802.1 | |tss_id=hg_121802.1 | ||
Revision as of 00:34, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89491664 |
|---|---|
| End of the center position in the TSS region: | 89491665 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000393282.2 BC051371 |
|---|---|
| Distance: | 94 |
| Num_trans: | 33 |
| All_trans: | ENST00000393282.2:94 BC051371:94 LP764880:174 LP764881:174 AB041035:174 ENST00000525278.1:265 ENST00000263317.9:284 NM_001291926:284 NM_016931:284 NM_001143836:284 NR_120406:284 ENST00000525196.5:299 BC034780:299 ENST00000529343.5:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413 |
TATA-Box annotation
| Distance to TSS: | -100 |
|---|---|
| Nearest PromoterID: | NR_120406 |
| Entrez ID: | 50507 |
| Nearest Unigene: | Hs.371036 |
| Nearest Refseq: | NM_016931 |
| Nearest Ensembl: | ENSG00000086991 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | KOX|KOX-1|RENOX |
| Gene Description: | NADPH oxidase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
