Difference between revisions of "TSS:Hg 12624.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000354381.3 | + | |all_trans=ENST00000354381.3:-114 AK091941:-114 AB284127:-225 BC060866:-225 ENST00000371153.9:-247 NM_181712:-247 NM_001320269:-247 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|dJ1078M7.1= | |dJ1078M7.1= | ||
|distance=-114 | |distance=-114 | ||
| − | |distance_to_tss= | + | |distance_to_tss=250 |
|end=62319187 | |end=62319187 | ||
|end_of_center_position=62319184 | |end_of_center_position=62319184 | ||
|entrez_id=163782 | |entrez_id=163782 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=ANKRD38 | + | |gene_alias=ANKRD38{{!}}dJ1078M7.1 |
|gene_description=KN motif and ankyrin repeat domains 4 | |gene_description=KN motif and ankyrin repeat domains 4 | ||
|gene_id=163782 | |gene_id=163782 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_181712 | |nearest_refseq=NM_181712 | ||
|nearest_unigene=Hs.283398 | |nearest_unigene=Hs.283398 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=62319180 | |start=62319180 | ||
|start_of_center_position=62319183 | |start_of_center_position=62319183 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000354381.3 | + | |transcript_name=ENST00000354381.3 AK091941 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_12624.1 | |tss_id=hg_12624.1 | ||
Revision as of 02:16, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 62319183 |
|---|---|
| End of the center position in the TSS region: | 62319184 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000354381.3 AK091941 |
|---|---|
| Distance: | -114 |
| Num_trans: | 7 |
| All_trans: | ENST00000354381.3:-114 AK091941:-114 AB284127:-225 BC060866:-225 ENST00000371153.9:-247 NM_181712:-247 NM_001320269:-247 |
TATA-Box annotation
| Distance to TSS: | 250 |
|---|---|
| Nearest PromoterID: | NM_181712 |
| Entrez ID: | 163782 |
| Nearest Unigene: | Hs.283398 |
| Nearest Refseq: | NM_181712 |
| Nearest Ensembl: | ENSG00000132854 |
| Gene Name: | KN motif and ankyrin repeat domains 4 |
| Gene Alias: | ANKRD38|dJ1078M7.1 |
| Gene Description: | KN motif and ankyrin repeat domains 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
